DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acp29AB and Mrc2

DIOPT Version :9

Sequence 1:NP_523512.2 Gene:Acp29AB / 34162 FlyBaseID:FBgn0015583 Length:234 Species:Drosophila melanogaster
Sequence 2:XP_006247693.1 Gene:Mrc2 / 498011 RGDID:1559436 Length:1514 Species:Rattus norvegicus


Alignment Length:133 Identity:30/133 - (22%)
Similarity:58/133 - (43%) Gaps:27/133 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 FHIEKNLMQTWFEAYVTCRKMNGHL---ANIQDEMELDGILALAPNNSYWIDISKLVENGGTFVS 183
            |:.:..|  :|.||:.:|.:....|   ..|.::..::|:|. ..:::.||.::.|..:||.   
  Rat   285 FNFQSTL--SWREAWASCEQQGADLLSITEIHEQTYINGLLT-GYSSTLWIGLNDLDTSGGW--- 343

  Fly   184 TLTGREPF-FVKWKSNQ-DTKKKNQCVYIYAKE----MSYDECFEKKSFVC-----------QAD 231
            ..:...|. ::.|:|:| |...:..|..|..:.    .::| |.....:||           |.|
  Rat   344 QWSDNSPLKYLNWESDQPDNPGEENCGVIRTESSGGWQNHD-CSIALPYVCKKKPNATAEPIQPD 407

  Fly   232 QWA 234
            :||
  Rat   408 RWA 410

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acp29ABNP_523512.2 CLECT 121..229 CDD:214480 26/126 (21%)
Mrc2XP_006247693.1 RICIN 77..>161 CDD:238092
RICIN 80..195 CDD:214672
FN2 214..262 CDD:128373
CLECT 281..395 CDD:153057 26/116 (22%)
CLECT 416..539 CDD:214480
CLECT 555..678 CDD:214480
CLECT 703..843 CDD:214480
CLECT 863..985 CDD:214480
CLECT 1006..1142 CDD:214480
CLECT 1165..1277 CDD:214480
CLECT 1294..1427 CDD:214480
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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