back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Acp29AB and Ly49si2

DIOPT Version :10

Sequence 1:	NP_523512.2	Gene:	Acp29AB / 34162	FlyBaseID:	FBgn0015583	Length:	234	Species:	Drosophila melanogaster
Sequence 2:	NP_001009498.1	Gene:	Ly49si2 / 494207	RGDID:	1359240	Length:	267	Species:	Rattus norvegicus

Alignment Length:	121	Identity:	26/121 - (21%)
Similarity:	46/121 - (38%)	Gaps:	30/121 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly   121 HFHIEKNLMQTWFEAYVTCRKMNGHLANIQDEMELDGILALAPNNSYWIDIS--------KLVEN 177
            :|.::|   :||......|:|....|..|.||.||..:.....::.|||.:|        ..::|
  Rat   157 YFILDK---KTWIRCQQACQKSRLSLLKIDDEDELKFLQLQVLSDQYWIGLSYNKAKEEWSWIDN 218

  Fly   178 GGTFVSTLTGREPFFVKWKSNQDTKKKNQ----CVYIYAKEMSYDECFEKKSFVCQ 229
            |.:..|.               :.||.|:    |:::....:....|..:...:||
  Rat   219 GQSEFSL---------------NLKKYNEKYGGCMFLSQTRLENAMCMNRYPCICQ 259

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.