DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Acp29AB and Sftpd

DIOPT Version :9

Sequence 1:	NP_523512.2	Gene:	Acp29AB / 34162	FlyBaseID:	FBgn0015583	Length:	234	Species:	Drosophila melanogaster
Sequence 2:	NP_037010.1	Gene:	Sftpd / 25350	RGDID:	3667	Length:	374	Species:	Rattus norvegicus

Alignment Length:	144	Identity:	32/144 - (22%)
Similarity:	58/144 - (40%)	Gaps:	26/144 - (18%)

- Green bases have known domain annotations that are detailed below.

  Fly   108 NIKMRRFE----------------KVGSRHFHIEKNLMQTWFEAYVTCRKMNGHLANIQDEMELD 156
            |.|::|.|                .||.:.|. ..|..:.:.:|...||:..|.||:.:...|..
  Rat   234 NGKLQRLEAAFSRYKKAALFPDGQSVGDKIFR-AANSEEPFEDAKEMCRQAGGQLASPRSATENA 297

  Fly   157 GI--LALAPNNSYWIDISKLVENGGTFVSTLTGREPFFVKW---KSNQDTKKKNQCVYIYAKEMS 216
            .:  |..|.:.:.::.::. |...|.|... ||....:..|   :.|.:...:| ||.|:.....
  Rat   298 AVQQLVTAHSKAAFLSMTD-VGTEGKFTYP-TGEALVYSNWAPGEPNNNGGAEN-CVEIFTNGQW 359

  Fly   217 YDE-CFEKKSFVCQ 229
            .|: |.|::..:|:
  Rat   360 NDKACGEQRLVICE 373

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Acp29AB	NP_523512.2	CLECT	121..229	CDD:214480	25/113 (22%)
Sftpd	NP_037010.1	Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	40..221
		Collagen	41..89	CDD:189968
		Collagen	66..124	CDD:189968
		Collagen	114..172	CDD:189968
		Surfac_D-trimer	223..268	CDD:286141	7/34 (21%)
		CLECT	261..374	CDD:295302	26/117 (22%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910