DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Acp29AB and CLEC4F

DIOPT Version :10

Sequence 1:NP_523512.2 Gene:Acp29AB / 34162 FlyBaseID:FBgn0015583 Length:234 Species:Drosophila melanogaster
Sequence 2:XP_011530937.1 Gene:CLEC4F / 165530 HGNCID:25357 Length:699 Species:Homo sapiens


Alignment Length:139 Identity:28/139 - (20%)
Similarity:55/139 - (39%) Gaps:25/139 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 LKQNETLAIIDTMEMRIASSLLEFKAQMEIQ--------LQPLKIIMRHHASNIKA-----SNNI 109
            |||....|...|.:.::..|.|: ||..|||        .:.|.:.::...|.:|.     ::..
Human   503 LKQGMKNASALTSQTQMLDSNLQ-KASAEIQRLRGDLENTKALTMEIQQEQSRLKTLHVVITSQE 566

  Fly   110 KMRRFE-----------KVGSRHFHIEKNLMQTWFEAYVTCRKMNGHLANIQDEMELDGILALAP 163
            :::|.:           |......:...::.::|.||...|.....|||::..:.|...::....
Human   567 QLQRTQSQLLQMVLQGWKFNGGSLYYFSSVKKSWHEAEQFCVSQGAHLASVASKEEQAFLVEFTS 631

  Fly   164 NNSYWIDIS 172
            ...|||.::
Human   632 KVYYWIGLT 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acp29ABNP_523512.2 CLECT 121..229 CDD:214480 11/52 (21%)
CLEC4FXP_011530937.1 CCDC158 <207..>581 CDD:464943 16/78 (21%)
CLECT_DC-SIGN_like 581..>657 CDD:153060 12/60 (20%)

Return to query results.
Submit another query.