DRSC/TRiP Functional Genomics Resources

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Protein Alignment Acp29AB and Clec4f

DIOPT Version :10

Sequence 1:NP_523512.2 Gene:Acp29AB / 34162 FlyBaseID:FBgn0015583 Length:234 Species:Drosophila melanogaster
Sequence 2:NP_446205.1 Gene:Clec4f / 114598 RGDID:621062 Length:550 Species:Rattus norvegicus


Alignment Length:248 Identity:48/248 - (19%)
Similarity:98/248 - (39%) Gaps:57/248 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 QQDIPNGKATLPSP--QTPQNTIDQIGINQNYWFTYNALKQN---------ETLAIIDTMEMRI- 74
            |.::.|||....|.  ||.:..:..:          :|||.|         :..|.:.:::..: 
  Rat   318 QIEVVNGKLKDSSRELQTLRRDLSDV----------SALKSNVQMLQSNLQKAKAEVQSLKTGLE 372

  Fly    75 ASSLLEFKAQ-MEIQLQPLKIIMRHHASNIKASNNIK---MRRFEKVGSRHFHIEKNLMQTWFEA 135
            |:..|..|.| .:..|:.|:..:..|....|..|.:.   |:.::....:.::..:: .::|.||
  Rat   373 ATKTLAAKIQGQQSDLEALQKAVAAHTQGQKTQNQVLQLIMQDWKYFNGKFYYFSRD-KKSWHEA 436

  Fly   136 YVTCRKMNGHLANIQDEMELDGILALAPNNSYWIDISKLVENG------GTFVSTLTGREPF-FV 193
            ...|.....|||::..:.|...::.:.....:||.::.....|      ||         || :|
  Rat   437 ENFCVSQGAHLASVTSQEEQAFLVQITNAVDHWIGLTDQGTEGNWRWVDGT---------PFDYV 492

  Fly   194 K----WKSNQDTK------KKNQCVYIYAKEMSYD-ECFEKKSFVC-QADQWA 234
            :    |:..|...      ::..||::  :.|..| .|....::|| ::..|:
  Rat   493 QSRRFWRKGQPDNWRHGNGEREDCVHL--QRMWNDMACGTAYNWVCKKSTDWS 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Acp29ABNP_523512.2 CLECT 121..229 CDD:214480 25/126 (20%)
Clec4fNP_446205.1 SMC_prok_B <100..390 CDD:274008 17/81 (21%)
CLECT_DC-SIGN_like 414..538 CDD:153060 25/135 (19%)

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