DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13384 and AVT3

DIOPT Version :9

Sequence 1:NP_723383.1 Gene:CG13384 / 34160 FlyBaseID:FBgn0032036 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_012776.1 Gene:AVT3 / 853710 SGDID:S000001629 Length:692 Species:Saccharomyces cerevisiae


Alignment Length:431 Identity:114/431 - (26%)
Similarity:200/431 - (46%) Gaps:67/431 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 HPTSNFDTLVHLLKGNIGTGILAMPDAFKNAGLYVGLFGTMIMGAICTHCMHMLVNCSHELCRRF 158
            |.:|....::.|||..:|||:|.:|.||.|.|     :|   ..|:|      |::|        
Yeast   295 HKSSTVKAVLLLLKSFVGTGVLFLPKAFHNGG-----WG---FSALC------LLSC-------- 337

  Fly   159 QQPSLDFSEVAYCSFES-------------GPLGLRRYSMLARRIVTTFLFITQIGFCCVYFLFV 210
                   :.::|..|.|             |.:|...|....:..:.:.:.::||||...|.:|.
Yeast   338 -------ALISYGCFVSLITTKDKVGVDGYGDMGRILYGPKMKFAILSSIALSQIGFSAAYTVFT 395

  Fly   211 ALNIKDVMDHYYKM-PVQIYLLIMLGPMIL----LNLVRNLKYLTPVSLVAALLTVAGLAITFSY 270
            |.|::...::::.: |..|.|...:...:|    |:|.||:..|:..:|:|.|..:.||...:.|
Yeast   396 ATNLQVFSENFFHLKPGSISLATYIFAQVLIFVPLSLTRNIAKLSGTALIADLFILLGLVYVYVY 460

  Fly   271 MLVDL------PDVHTVKPVATWATLPLYFGTAIYAFEGIGVVLPLENNMRTPEDFGGTTGVLNT 329
            .:..:      .|...:...|.|:   |:.||||:.|||||:::|::.:|:.|:.|..:   |:.
Yeast   461 SIYYIAVNGVASDTMLMFNKADWS---LFIGTAIFTFEGIGLLIPIQESMKHPKHFRPS---LSA 519

  Fly   330 GMVIVACLYTAVGFFGYLKYGEHVEGSITLNLPQGDTLSQLVRISMAVAIFLSYTLQFYVPVNIV 394
            .|.|||.::.:.|...|..:|..|:..:.||.||..:.:..|::..|:||.||..||.:..:.|:
Yeast   520 VMCIVAVIFISCGLLCYAAFGSDVKTVVLLNFPQDTSYTLTVQLLYALAILLSTPLQLFPAIRIL 584

  Fly   395 E----PFVRSHFDTTRAKDLSATVLRVVLVTFTFLLATCIPN-LGSIISLVGAVSSSALALIAPP 454
            |    |...|.....:.|.|. ...|..:|..|.:||....| |...:||||:.:...|..|.||
Yeast   585 ENWTFPSNASGKYNPKVKWLK-NYFRCAIVVLTSILAWVGANDLDKFVSLVGSFACIPLIYIYPP 648

  Fly   455 IIEVITFYNVGYGRFNWMLWKDVLILIFGLCGFVFGTWASL 495
            ::........|..|...:|  |:::::||:....:.:|.::
Yeast   649 LLHYKASILSGTSRARLLL--DLIVIVFGVAVMAYTSWQTI 687

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13384NP_723383.1 SdaC 92..484 CDD:223884 112/418 (27%)
SLC5-6-like_sbd 94..495 CDD:294310 114/429 (27%)
AVT3NP_012776.1 Aa_trans 295..687 CDD:279788 114/429 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 151 1.000 Domainoid score I928
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 153 1.000 Inparanoid score I1099
Isobase 1 0.950 - 0 Normalized mean entropy S2463
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 1 1.000 - - mtm9188
orthoMCL 1 0.900 - - OOG6_100466
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R126
SonicParanoid 1 1.000 - - X121
TreeFam 1 0.960 - -
1211.700

Return to query results.
Submit another query.