DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13384 and AVT5

DIOPT Version :9

Sequence 1:NP_723383.1 Gene:CG13384 / 34160 FlyBaseID:FBgn0032036 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_009464.2 Gene:AVT5 / 852189 SGDID:S000000185 Length:459 Species:Saccharomyces cerevisiae


Alignment Length:487 Identity:99/487 - (20%)
Similarity:189/487 - (38%) Gaps:137/487 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 TLVHLLKGNIGTGILAMPDAFKNAGLYVGLFGTMIMGAICTHCMHML-----------VNCSHEL 154
            ||:|..   .|.|:||||.|||..||..||. |:....||:.|..:|           .|.|...
Yeast    11 TLLHTA---CGAGVLAMPFAFKPFGLMPGLI-TLTFCGICSLCGLLLQTRIAKYVPKSENASFAK 71

  Fly   155 CRRFQQPSL----DFSEVAYCSFESGPLGLRRYSMLARRIVTTFLFITQIGFCCVYFLFVALNIK 215
            ..:...||:    ||:....| |..|...|.....|..:||.:..:....            |:.
Yeast    72 LTQLINPSISVVFDFAIAVKC-FGVGVSYLIIVGDLVPQIVQSIFYRNDD------------NMS 123

  Fly   216 DVMDHYYKMPVQIY----LLIMLGPMILLNLVRNLKYLTPVSLVAALLTVAGLAITF-------- 268
            ...:|:..:..::|    ::.::.|:.....:.:|:|.:.:::| ::..::||.|..        
Yeast   124 GSQEHHMFLDRRLYITLIIVFVISPLCFKRSLNSLRYASMIAIV-SVAYLSGLIIYHFVNRHQLE 187

  Fly   269 ---SYMLVDLPDVHTVKPVATWATLPLYFGTAIYAF----EGIGVVLPLENNMRTPEDFGGTTGV 326
               .|.:|...|..:..|:   .|||::    ::|:    ....|:     |.:..:.|.....:
Yeast   188 RGQVYFMVPHGDSQSHSPL---TTLPIF----VFAYTCHHNMFSVI-----NEQVDKSFKVIRRI 240

  Fly   327 LNTGMVIVACLYTAVGFFGYLKYGEHVEGSITLNLPQGDTLSQLVRISMAVAIFLSYTLQ----- 386
            ....:|:...||..:|..||:.:||::.|:| |.|......:.:.|::|.:.:.|::.||     
Yeast   241 PIFAIVLAYFLYIIIGGTGYMTFGENIVGNI-LTLYPNSISTTIGRLAMLLLVMLAFPLQCHPCR 304

  Fly   387 -----------------------FYVPV---------------NIVEPFVRSHFDTTRAKDLSAT 413
                                   .::|:               |..||.:||  ::.|    ...
Yeast   305 SSVKNIIIFIENFRKGKLYDNRASFIPLDNFNSEDPQEAPTQQNNEEPNLRS--ESLR----HIN 363

  Fly   414 VLRVVLVTFTFLLATCIPNLGSIISLVGAVSSSALALIAPPII------------------EVIT 460
            ::.:.::.|::|||..|.:|..::::|||..|::::.|.|.:.                  .:..
Yeast   364 IITLCILLFSYLLAISITSLAKVLAIVGATGSTSISFILPGLFGYKLIGSEFTGTNERVPTSIKI 428

  Fly   461 FYNVGYGRFNWMLWKDVLILIFGLCGFVF-GT 491
            |..:....|.|    .:.:::..|...|| ||
Yeast   429 FKYLSLSLFIW----GIAVMVASLSAIVFLGT 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13384NP_723383.1 SdaC 92..484 CDD:223884 94/477 (20%)
SLC5-6-like_sbd 94..495 CDD:294310 99/487 (20%)
AVT5NP_009464.2 Aa_trans 1..445 CDD:279788 94/474 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X121
TreeFam 00.000 Not matched by this tool.
43.820

Return to query results.
Submit another query.