DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13384 and AT5G02170

DIOPT Version :9

Sequence 1:NP_723383.1 Gene:CG13384 / 34160 FlyBaseID:FBgn0032036 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_195837.2 Gene:AT5G02170 / 831896 AraportID:AT5G02170 Length:526 Species:Arabidopsis thaliana


Alignment Length:551 Identity:123/551 - (22%)
Similarity:225/551 - (40%) Gaps:110/551 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TPLT--NLQQIPEGAPRKKK-----MTERQPLLLQSDASDYEGSRGSAARPVRSSPPDNTLVNVH 62
            |||:  ..:.:|...||..:     :|...|....|..|.:...|.|:.....:|.|....:.: 
plant    34 TPLSRNRSEDVPVPWPRSYRQSMDLLTGVTPPTSTSFVSSFRQRRQSSVFGSFTSSPSKQQLLI- 97

  Fly    63 SEDSLAASGSGDDEIGSTDKSYNPTHHR-----DLEHPTSN----FDTLVHLLKG-NI--GTGIL 115
            .:|.:.:|      :.|:.||:..:|.:     ||..|..|    |...|  |.| |:  |..:|
plant    98 DKDEIQSS------VVSSIKSFLASHLQLSVPGDLLTPQENRSCTFSQSV--LNGINVLCGVALL 154

  Fly   116 AMPDAFKNAGLYVGLFGTMIMGAICTHCMHMLVNCSHELCRRFQQPSLDFSEVAYCSFESGP--- 177
            .||.|.|..| ::|||.....|.|..:...:|..|                      .|:.|   
plant   155 TMPYAVKEGG-WLGLFILFSFGIITFYTGILLKRC----------------------LENSPGIH 196

  Fly   178 ----LGLRRYSMLARRIVTTFLFITQIGFCCVYFLFVALNIKDV------------MDHYYKMPV 226
                :|...:....|.:|:..|::.....|..|.:.::.|:..:            :|......:
plant   197 TYPDIGQAAFGTTGRILVSILLYVELYASCVEYIIMMSDNLSRMFPNTSLYINGFSLDSTQVFAI 261

  Fly   227 QIYLLIMLGPMILLNLVRNLKYLTPVSLVAALL---------TVAGLAITFSYMLVDLPDVHTVK 282
            ...|:::  |.:.|..:..|.||:...:::::|         :|.|:....|...:|:.::    
plant   262 TTTLIVL--PTVWLKDLSLLSYLSAGGVISSILLALCLFWAGSVDGVGFHISGQALDITNI---- 320

  Fly   283 PVATWATLPLYFGTAIYAFEGIG--VVLP-LENNMRTPEDFGGTTGVLNTGMVIVACLYTAVGFF 344
            |||          ..||.| |.|  .|.| :.::|:.|..|   ..||..........|.||...
plant   321 PVA----------IGIYGF-GFGSHSVFPNIYSSMKEPSKF---PTVLLISFAFCTLFYIAVAVC 371

  Fly   345 GYLKYGEHVEGSITLNLPQGDTLSQLVRISMAVAIFLSYTLQFYVPVNI-VEPFVRSHFDTTRAK 408
            |:..:|:.::...|||:|...|.|::...:..|.....|.|.. .||.: :|..:.|.....|:|
plant   372 GFTMFGDAIQSQFTLNMPPHFTSSKIAVWTAVVTPMTKYALTI-TPVMLSLEELIPSSSRKMRSK 435

  Fly   409 DLSATVLRVVLVTFTFLLATCIPNLGSIISLVGAVSSSALALIAPPIIEVITFYNVGYGRF-NWM 472
            .:| .:.|.:||..|.::|..:|...::.:|:|:..:..:|||.|    .:.:.::..||. |:.
plant   436 GVS-MLFRTILVLSTLVVALTVPFFATVAALIGSFIAMLIALIFP----CLCYISIMKGRLTNFQ 495

  Fly   473 LWKDVLILIFGLCGFVFGTWASLAQILNDRT 503
            :...:||:|.|:.....||::::|:::.:.|
plant   496 IGICILIVIIGIVSGCCGTYSAIARLIGEMT 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13384NP_723383.1 SdaC 92..484 CDD:223884 97/431 (23%)
SLC5-6-like_sbd 94..495 CDD:294310 99/440 (23%)
AT5G02170NP_195837.2 SLC5-6-like_sbd 136..495 CDD:320982 91/409 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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