DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13384 and AT5G02180

DIOPT Version :9

Sequence 1:NP_723383.1 Gene:CG13384 / 34160 FlyBaseID:FBgn0032036 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001331278.1 Gene:AT5G02180 / 831862 AraportID:AT5G02180 Length:550 Species:Arabidopsis thaliana


Alignment Length:542 Identity:120/542 - (22%)
Similarity:226/542 - (41%) Gaps:108/542 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEDLTPLT--NLQQIPEGAPRK--KKMTERQPLLLQSDASDYEGSRGSAARPVRSSP-PD--NTL 58
            |:.||.:|  ::..:|:.:.|:  ....::|    ||...|...|  |:::|:.|.| ||  .|:
plant    77 MDLLTGMTPPSVSFMPQSSSRRLASSFQKKQ----QSSFCDSLSS--SSSKPLLSQPVPDKEETI 135

  Fly    59 VNVHSEDSLAASGSGDDEIGSTDKSYNPTHHRDLEHPTSNFDTLVH-LLKG-NI--GTGILAMPD 119
            :.|:.:..|..|.:                  ||..|..|..:... :|.| |:  |.|::.||.
plant   136 LPVNPQSQLKLSVT------------------DLPLPEPNLCSFSQSVLNGTNVLCGLGLITMPY 182

  Fly   120 AFKNAGLYVGLFGTMIMGAICTHCMHMLVNCSHELCRRFQQPSLDFSEVAYCSFESGP------- 177
            |.|.:| ::||...:..|.|..:...::..|                      .||.|       
plant   183 AIKESG-WLGLPILLFFGVITCYTGVLMKRC----------------------LESSPGIQTYPD 224

  Fly   178 LGLRRYSMLARRIVTTFLFITQIGFCCVYFLFVALNIKDV-------------MDHYYKMPVQIY 229
            :|...:.:..|.|::..|::.....|..|.:.::.|:..:             :|......:...
plant   225 IGQAAFGITGRFIISILLYVELYAACVEYIIMMSDNLSGLFPNVSLSIASGISLDSPQIFAILTT 289

  Fly   230 LLIMLGPMILLNLVRNLKYLTPVSLVAALLTVAGLAITFSYMLVDLPDVHTVKPVATWATLPLYF 294
            ||::  |.:.|..:..|.||:...::|::|  .|:.: |....||....|....|...:.||:..
plant   290 LLVL--PTVWLKDLSLLSYLSVGGVLASIL--LGICL-FWVGAVDGIGFHATGRVFDLSNLPVTI 349

  Fly   295 GTAIYAFEGIGVVLPLENNMRTPEDFGGTTGVLNTGMVIVAC------LYTAVGFFGYLKYGEHV 353
            |...:.:.|..|...:.::|:.|..|         .:|:|.|      ||.||...||..:||.|
plant   350 GIFGFGYSGHSVFPNIYSSMKDPSRF---------PLVLVICFSFCTVLYIAVAVCGYTMFGEAV 405

  Fly   354 EGSITLNLPQGDTLSQLVRISMAVAIFLSYTLQFYVPVNIVEPFVRSHFDTTRAKDLSATVL-RV 417
            |...|||:|:....|::...:..:.....|.|.....|..:|..:    .|.:.:....::| |.
plant   406 ESQFTLNMPKHFFPSKVAVWTAVITPMTKYALTITPIVMSLEELI----PTAKMRSRGVSILFRT 466

  Fly   418 VLVTFTFLLATCIPNLGSIISLVGAVSSSALALIAPPIIEVITFYNVGYGRF-NWMLWKDVLILI 481
            :|||.|.::|..:|....:.:|:|:..:..:|||.|    .:.:.::..|:. |..:...:.|::
plant   467 MLVTSTLVVALSVPFFAIVAALIGSFLAMLVALIFP----CLCYLSILKGKLSNTQIGLCIFIIV 527

  Fly   482 FGLCGFVFGTWASLAQILNDRT 503
            ||:.....||:::::::.|..|
plant   528 FGVVSGCCGTYSAISRLANQMT 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13384NP_723383.1 SdaC 92..484 CDD:223884 93/423 (22%)
SLC5-6-like_sbd 94..495 CDD:294310 95/432 (22%)
AT5G02180NP_001331278.1 SLC5-6-like_sbd 160..542 CDD:320982 93/426 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

Return to query results.
Submit another query.