DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13384 and slc36a4

DIOPT Version :9

Sequence 1:NP_723383.1 Gene:CG13384 / 34160 FlyBaseID:FBgn0032036 Length:504 Species:Drosophila melanogaster
Sequence 2:XP_002664741.3 Gene:slc36a4 / 504109 ZFINID:ZDB-GENE-050309-239 Length:488 Species:Danio rerio


Alignment Length:457 Identity:181/457 - (39%)
Similarity:263/457 - (57%) Gaps:37/457 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 ASGSGDDEIGSTDKSYNPTHHRDLEHPTSNFDTLVHLLKGNIGTGILAMPDAFKNAGLYVGLFGT 133
            |.|..::|..:.|...:..|   |....:...||:||||||||||:|.:|.|.||||:.:|....
Zfish    19 AEGEEEEEDENVDGDEDSKH---LPQGITFTQTLLHLLKGNIGTGLLGLPLAVKNAGIVLGPVSL 80

  Fly   134 MIMGAICTHCMHMLVNCSHELCRRFQQPSLDFSEVAYCSFE-SGPLGLRRYSMLARRIVTTFLFI 197
            ::||.:|.||||:||||||:|..|.::..|.:||....:.| |....|||.:...|.:|..||.:
Zfish    81 VLMGVVCVHCMHILVNCSHQLSERLKRSPLGYSETVAAAMELSSSQCLRRSAHFGRHLVNFFLVL 145

  Fly   198 TQIGFCCVYFLFVALNIKDVMDHYY-----------------------KMPVQIYLLIMLGPMIL 239
            ||:|||.|||:|:|.|||.||:..:                       .:.:::|::.:|..:|:
Zfish   146 TQLGFCSVYFVFLAENIKQVMEGTHMNSTAETVLLSSNSSEASVASSVAIDLRLYMVFLLPFIIV 210

  Fly   240 LNLVRNLKYLTPVSLVAALLTVAGLAITFSYMLVDLPDVHTVKPVATWATLPLYFGTAIYAFEGI 304
            |..:|:|:.:..:|.:|.|.....|...|||:|.||.|...:...:||...|.:|||||:|||||
Zfish   211 LTFIRDLRNMAALSAIANLCMAISLIFIFSYILNDLSDPRRLPYASTWRKFPFFFGTAIFAFEGI 275

  Fly   305 GVVLPLENNMRTPEDFGGTTGVLNTGMVIVACLYTAVGFFGYLKYGEHVEGSITLNLPQGDTLSQ 369
            ||||||||.||.|:.|   ...||.||..:..||..:...|||::.:.::||||||||.....:|
Zfish   276 GVVLPLENQMREPKRF---PQALNIGMGFIIVLYVTLATLGYLRFRDDIKGSITLNLPHDSWSNQ 337

  Fly   370 LVRISMAVAIFLSYTLQFYVPVNIVEPFV--RSHFDTTRAKDLSATVLRVVLVTFTFLLATCIPN 432
            ||::..:..:|:|:.:||:||..|:.|.:  |......|..|||   ||.:||..|.:.|..||.
Zfish   338 LVKVLYSFGVFVSFAVQFFVPAEILLPPMCERVRKSWRRVADLS---LRALLVCLTCVTAVLIPR 399

  Fly   433 LGSIISLVGAVSSSALALIAPPIIEVITFYNVGYGRFNWMLWKDVLILIFGLCGFVFGTWASLAQ 497
            |..:||||||||||||||:.||::|:|.|.:......  :|.||:.|...|..||:.||:.::.:
Zfish   400 LDLVISLVGAVSSSALALVFPPLVELIAFPSQPPPPM--LLLKDISIAALGFIGFLTGTYVTVEE 462

  Fly   498 IL 499
            |:
Zfish   463 II 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13384NP_723383.1 SdaC 92..484 CDD:223884 170/417 (41%)
SLC5-6-like_sbd 94..495 CDD:294310 174/426 (41%)
slc36a4XP_002664741.3 SLC5-6-like_sbd 42..460 CDD:294310 174/425 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170594558
Domainoid 1 1.000 309 1.000 Domainoid score I1306
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56300
Inparanoid 1 1.050 312 1.000 Inparanoid score I2564
OMA 1 1.010 - - QHG54358
OrthoDB 1 1.010 - - D284074at33208
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 1 1.000 - - mtm6436
orthoMCL 1 0.900 - - OOG6_100466
Panther 1 1.100 - - O PTHR22950
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R126
SonicParanoid 1 1.000 - - X121
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
1514.940

Return to query results.
Submit another query.