DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13384 and Slc36a4

DIOPT Version :9

Sequence 1:NP_723383.1 Gene:CG13384 / 34160 FlyBaseID:FBgn0032036 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_001101597.1 Gene:Slc36a4 / 315439 RGDID:1311528 Length:500 Species:Rattus norvegicus


Alignment Length:472 Identity:191/472 - (40%)
Similarity:271/472 - (57%) Gaps:43/472 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 LVNVHSEDSLAASGSGDDEIGSTDKSYNPTHHRDLEHPTSNFDTLVHLLKGNIGTGILAMPDAFK 122
            |:|..:.|     ||.|:|...|.......:..|.:|..|...||:||||||||||:|.:|.|.|
  Rat    23 LINEQNFD-----GSSDEEQEQTLLPMQKHYQLDGQHGISFVQTLMHLLKGNIGTGLLGLPLAIK 82

  Fly   123 NAGLYVGLFGTMIMGAICTHCMHMLVNCSHELCRRFQQPSLDFSEVAYCSFESGPLG-LRRYSML 186
            |||:.:|....:.:|.|..||||:||.|||.||:||::.:|.:|:....:.|:.|.. |:|.:..
  Rat    83 NAGIVLGPISLVFIGIISVHCMHILVRCSHFLCQRFKKSTLGYSDTVSFAMEASPWSCLQRQAAW 147

  Fly   187 ARRIVTTFLFITQIGFCCVYFLFVALNIKDVMDHYYKMPV-------------------QIYLLI 232
            .|.:|..||.|||:|||.||.:|:|.|:|.|.:...:..|                   ::|:|.
  Rat   148 GRSVVDFFLVITQLGFCSVYIVFLAENVKQVHEGLLETTVVVSNSSDLSQVCERRSVDLRVYMLC 212

  Fly   233 MLGPMILLNLVRNLKYLTPVSLVAALLTVAGLAITFSYMLVDLPDVHTVKPVATWATLPLYFGTA 297
            .|..:|||..:|.||.|..:|.:|.:...|.|.|.:.|::..:||.|.:..||.|...||:||||
  Rat   213 FLPLLILLVFIRELKSLFVLSFLANISMAASLVIIYQYVVRSMPDPHNLPIVAGWKKYPLFFGTA 277

  Fly   298 IYAFEGIGVVLPLENNMRTPEDFGGTTGVLNTGMVIVACLYTAVGFFGYLKYGEHVEGSITLNLP 362
            ::|||||||||||||.||..:.|   ...||.||.||..||.::...||:.:.:.::||||||||
  Rat   278 VFAFEGIGVVLPLENQMRESKRF---PQALNIGMAIVTVLYISLATLGYMCFRDEIKGSITLNLP 339

  Fly   363 QGDTLSQLVRISMAVAIFLSYTLQFYVPVNIVEPFV--RSHFDTTRAKDLSATVLRVVLVTFTFL 425
            |...|.|.|:|..:..||::|::|||||..|:.|.|  |.|   .:.|.:....:|.:||:.|..
  Rat   340 QDMWLYQSVKILYSFGIFVTYSIQFYVPAEIIIPAVTARLH---AKWKCICDFGIRSLLVSITCA 401

  Fly   426 LATCIPNLGSIISLVGAVSSSALALIAPPIIEVITF----YNVGYGRFNWMLWKDVLILIFGLCG 486
            .|..||.|..:||.|||||||.||||.||::|::||    |||      ||:.|::.|...|..|
  Rat   402 GAVLIPRLDIVISFVGAVSSSTLALILPPLVEILTFSKDHYNV------WMVLKNISIAFTGFVG 460

  Fly   487 FVFGTWASLAQILNDRT 503
            |:.||:.::.:|:...|
  Rat   461 FLLGTYVTVEEIIYPTT 477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13384NP_723383.1 SdaC 92..484 CDD:223884 175/417 (42%)
SLC5-6-like_sbd 94..495 CDD:294310 180/426 (42%)
Slc36a4NP_001101597.1 SLC5-6-like_sbd 54..469 CDD:294310 180/426 (42%)
PotE <223..477 CDD:223605 114/265 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166352602
Domainoid 1 1.000 316 1.000 Domainoid score I1234
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H56300
Inparanoid 1 1.050 321 1.000 Inparanoid score I2430
OMA 1 1.010 - - QHG54358
OrthoDB 1 1.010 - - D284074at33208
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 1 1.000 - - mtm8993
orthoMCL 1 0.900 - - OOG6_100466
Panther 1 1.100 - - O PTHR22950
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X121
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1615.770

Return to query results.
Submit another query.