DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13384 and avt3

DIOPT Version :9

Sequence 1:NP_723383.1 Gene:CG13384 / 34160 FlyBaseID:FBgn0032036 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_593551.1 Gene:avt3 / 2543612 PomBaseID:SPAC3H1.09c Length:656 Species:Schizosaccharomyces pombe


Alignment Length:505 Identity:127/505 - (25%)
Similarity:220/505 - (43%) Gaps:86/505 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    37 DYEGSRGSAARPVRSSPPDNTLVNVHSEDSLAASG-------SGDDEIGSTD-----KSYNPT-- 87
            |:..:|.|:.....::..:...:|.:..:.|:..|       |.:||...||     :..||:  
pombe   185 DFLRNRASSISMSSNAHGNPNFLNRNFIEFLSVYGHFAGEELSEEDEDEDTDDFAMPRDVNPSLI 249

  Fly    88 --------------HHR-DLEHP--TSNFDTLVHLLKGNIGTGILAMPDAFKNAGLYVGLFGTMI 135
                          |.| .|:.|  .||...::.|||..:|||:|.:|.|||..||.......:|
pombe   250 HSTVPSEQEPLISRHGRYKLQTPGNASNGKAVLLLLKSFVGTGVLFLPKAFKLGGLVFSSATLLI 314

  Fly   136 MGAICTHCMHMLVNCSHELCRRFQQPSLDFSEVAYCSFESGPLGLRRYSMLARRIVTTFLFITQI 200
            :|.:...|..:|:.      .|.:.|.         ||  |.:|...|....|..:...:.::||
pombe   315 VGVLSHICFLLLIQ------TRMKVPG---------SF--GDIGGTLYGPHMRFAILASIVVSQI 362

  Fly   201 GFCCVYFLFVALN----IKDVMDHYYKMPVQIYLLIMLGPMILLNLVRNLKYLTPVSLVAALLTV 261
            ||...|..|||..    :|.:...:.:..:.:::.|.....:.|:|||.:..|:..:|:|.:..:
pombe   363 GFSSAYISFVASTLQACVKVISTTHREYHLAVFIFIQFLVFVPLSLVRKISKLSATALIADVFIL 427

  Fly   262 AGLAITFSYMLVDLPDVHTVKPVATWA-----TLPLYFGTAIYAFEGIGVVLPLENNMRTPEDFG 321
            .|:...:.:.::.|    ..|.:|..|     ...|:.|.||:.:|||.::||::..|..|::..
pombe   428 LGILYLYFWDVITL----ATKGIADVAMFNKTDFSLFIGVAIFTYEGICLILPIQEQMAKPKNLP 488

  Fly   322 G-TTGVLNTGMVIVACLYTAVGFFGYLKYGEHVEGSITLNLPQGDTLSQLVRISMAVAIFLSYTL 385
            . .|||    |..::.|:.::|...|..:|..|:..:.||:|: .|.:.:::...|:||.||..|
pombe   489 KLLTGV----MAAISLLFISIGLLSYAAFGSKVKTVVILNMPE-STFTVIIQFLYAIAILLSTPL 548

  Fly   386 QFYVPVNIVEP--FVRSHFDTTRAKDLSATVLRVVLVTFTFLLATCIPNLGS-----IISLVGAV 443
            |.:..:.|:|.  |.||.....:.| .....|||::|    :||..|...||     .:|:||:|
pombe   549 QLFPAIAIIEQGIFTRSGKRNRKIK-WRKNYLRVLIV----ILAILISWAGSSRLDLFVSMVGSV 608

  Fly   444 SSSALALIAPPIIEVITFYNVGYGRFNWML-WKDVLILIFGLCGFVFGTW 492
            ....|..:.||::......|      ||:| ..|:.:...|.....|.|:
pombe   609 CCIPLIYMYPPMLHYKACAN------NWILRTLDIFMFTIGAFAMAFTTY 652

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13384NP_723383.1 SdaC 92..484 CDD:223884 109/411 (27%)
SLC5-6-like_sbd 94..495 CDD:294310 111/419 (26%)
avt3NP_593551.1 SdaC 270..656 CDD:223884 111/420 (26%)
Aa_trans 273..656 CDD:279788 110/417 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 126 1.000 Domainoid score I1377
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 126 1.000 Inparanoid score I1449
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000138
OrthoInspector 1 1.000 - - otm47069
orthoMCL 1 0.900 - - OOG6_100466
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R126
SonicParanoid 1 1.000 - - X121
TreeFam 1 0.960 - -
1110.750

Return to query results.
Submit another query.