DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13384 and avt5

DIOPT Version :9

Sequence 1:NP_723383.1 Gene:CG13384 / 34160 FlyBaseID:FBgn0032036 Length:504 Species:Drosophila melanogaster
Sequence 2:NP_595211.1 Gene:avt5 / 2540081 PomBaseID:SPBC1685.07c Length:420 Species:Schizosaccharomyces pombe


Alignment Length:418 Identity:91/418 - (21%)
Similarity:170/418 - (40%) Gaps:91/418 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 ASGSGDDEIGSTDKSYNPTHHRDLEHPTSNFDTLVHLLKGNIGTGILAMPDAFKNAGLYVGLFG- 132
            :||..|..||.                ...|.::::|....:|.|||::|:||...||   ||| 
pombe     8 SSGPADVHIGK----------------AGFFSSVINLANTILGAGILSLPNAFTKTGL---LFGC 53

  Fly   133 -TMIMGAICTHC-MHMLVNCSHELCRRFQQPSLDFSEVAYCSFES------GPLGLRRYSMLARR 189
             |::..|..:.. ::.:..|:    .|..:....|:.||..:|.|      ..:.::.:.:....
pombe    54 LTIVFSAFASFLGLYFVSQCA----ARLPRGKASFAAVAKHTFPSLAVVFDASIAVKCFGVAVSY 114

  Fly   190 IVTTFLFITQI----GFCCVYFLFVALNIKDVMDHYYKMPVQIYLLIMLGPMILLNLVRNLKYLT 250
            :|.....:.||    |.....||             .:....::.|.:|.|:..|..:.:|::.:
pombe   115 LVIVGDLMPQIAPSLGLSSPMFL-------------RRQTWIVFALFVLTPLSFLKRLDSLRHTS 166

  Fly   251 PVSLVAALLTVAGLAITFSYMLVDLPDVHTVKPVATW----------ATLPLY-FGTAIY--AFE 302
            .:||:|....|  ..:.:.:::.|     |||....:          :.||:: ||...:  ||.
pombe   167 VISLIALCYLV--FIVLYHFIIGD-----TVKGEIRYFVPESGFGYLSVLPVFVFGFTCHQNAFS 224

  Fly   303 GIGVVLPLENNMRTPEDFGGTTGVLN----TGMVIVACLYTAVGFFGYLKYGEHVEGSITLNLPQ 363
            .|       |.:|   :|  :.|.:|    |.::....||..|...|||.:|....|:|   :..
pombe   225 VI-------NEVR---NF--SQGFVNFTMFTAIISSTLLYLLVAITGYLSFGSLASGNI---IAM 274

  Fly   364 GDTLSQLV---RISMAVAIFLSYTLQFYVPVNIVEPFVRSHFDTTRAKDLSATVLRVVLVTFTFL 425
            .|..|..:   ::::.|.:..||.||.:...|.|...:|..:......|....|:.:.::.||..
pombe   275 YDNTSIWIIGGKLAIVVLVLFSYPLQCHPCRNSVYQAIRRSYSAHDMSDGYHAVITLCILLFTHS 339

  Fly   426 LATCIPNLGSIISLVGAVSSSALALIAP 453
            ||..:.:|..:::.||:..|:.::.|.|
pombe   340 LALLLSSLEMVLAFVGSTGSTFISFILP 367

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13384NP_723383.1 SdaC 92..484 CDD:223884 86/395 (22%)
SLC5-6-like_sbd 94..495 CDD:294310 86/393 (22%)
avt5NP_595211.1 SdaC 11..418 CDD:223884 89/415 (21%)
SLC5-6-like_sbd 17..409 CDD:294310 87/409 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0814
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54358
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

Return to query results.
Submit another query.