DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AlaRS and Cdc23

DIOPT Version :10

Sequence 1:NP_523511.2 Gene:AlaRS / 34156 FlyBaseID:FBgn0027094 Length:966 Species:Drosophila melanogaster
Sequence 2:NP_848124.1 Gene:Cdc23 / 52563 MGIID:1098815 Length:597 Species:Mus musculus


Alignment Length:653 Identity:121/653 - (18%)
Similarity:226/653 - (34%) Gaps:218/653 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   340 AKPGFFATLVNTVVDLLGDAFPEVKKDPQHIIDIINEEELQFLKTLTRGRNLLNRTIEKLGNQTT 404
            |.||     |:||.|.  ....|:||            :|..:..|||.|.||:.:         
Mouse    16 AVPG-----VSTVADF--SDLQEIKK------------QLLLIAGLTRERGLLHSS--------- 52

  Fly   405 IPGDVAWRLYDTYGFP-VDLTQL-----MAEEKSLKI----------DMDGYEAAKH-----NS- 447
                 .|.....:..| :.|::|     :.||.:..:          |:..|:.|.|     || 
Mouse    53 -----KWSAELAFSLPALPLSELQPPPPLTEEDAQDVDAYTLAKAYFDVKEYDRAAHFLHGCNSK 112

  Fly   448 -----YVLSQG-KGASKIEEINLDVHAISQLQEQGVPPTNDTFK-------YKYEAVSDERDSAY 499
                 |:.|:. .|..|.::..:|  ::..|::..|  .|:..:       .|::|...:....|
Mouse   113 KAYFLYMYSRYLSGEKKKDDETVD--SLGPLEKGQV--KNEALRELRVELSRKHQARGLDGFGLY 173

  Fly   500 NYGVCNSKI------VALRFENQFVNEITSG---QKAGIVLDK-------------TNFYAESGG 542
            .|||...|:      :.:..|...|..:..|   :...::.||             ..|:.   .
Mouse   174 LYGVVLRKLDLVKEAIDVFVEATHVLPLHWGAWLELCNLITDKEMLKFLSLPDTWMKEFFL---A 235

  Fly   543 QIYDQGALVKVNDEANEFLVDRVYNRGGYIL--------HIGVVEGTLKVGDELEL-------HI 592
            .||.:..|::...:..:.|:|..:::..||:        :|..::..|.:.:||..       ::
Mouse   236 HIYTELQLIEEALQKYQHLIDVGFSKSSYIVSQIAVAYHNIRDIDKALSIFNELRKQDPYRIENM 300

  Fly   593 DVERRWL---TMKNHSATHALNHCLLQ--------VLG-----KDTEQKGSLVVPEKLRFDFNSK 641
            |.....|   :||:..:..|.|.|.:.        |:|     :...:|.:|.....|:.:....
Mouse   301 DTFSNLLYVRSMKSELSYLAHNLCEIDKYRVETCCVIGNYYSLRSQHEKAALYFQRALKLNPRYL 365

  Fly   642 AAMTIEQVSKTEQLTKE-MVYKNVPIYAKESKLALAKKIRGLRSVFD-----EVYPDPVRVISFG 700
            .|.|:        :..| |..||.....:..:.|:....|..|:.:.     |:...|...:.:.
Mouse   366 GAWTL--------MGHEYMEMKNTSAAIQAYRHAIEVNKRDYRAWYGLGQTYEILKMPFYCLYYY 422

  Fly   701 VPVDELEQNPDSEAGEQTSVEFCGGTHLRRSGHIMDFVISSEEAIAKGIRRIVALTGPEALKALK 765
            ....:|..| ||                                     |.:|||          
Mouse   423 RRAHQLRPN-DS-------------------------------------RMLVAL---------- 439

  Fly   766 KSEAFEQ--EIVRLK-------ATIDNDKSG--KDSKSHVKEIVELTEQISHATIPYVKKDEMRN 819
             .|.:|:  ::|..|       |..|.:|..  |.:|.| :::.| :||.:...|.|::.     
Mouse   440 -GECYEKLNQLVEAKKCYWRAYAVGDVEKMALVKLAKLH-EQLTE-SEQAAQCYIKYIQD----- 496

  Fly   820 LLKGLKKTLDDKERALRAAVSVTVVERAKTLCEANPNATVLVEQLEAFNNT----KALDAALKQV 880
             :....:|::.    |..:.:...:.:....|:....|:...::..|||:|    |||...:.|:
Mouse   497 -IYSCGETVEH----LEESTAFRYLAQYYFKCKLWDEASTCAQKCCAFNDTREEGKALLRQILQL 556

  Fly   881 RSQ 883
            |:|
Mouse   557 RNQ 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlaRSNP_523511.2 PLN02900 5..963 CDD:215487 121/653 (19%)
Cdc23NP_848124.1 TPR 1 27..63 11/61 (18%)
ANAPC8 45..148 CDD:427675 22/120 (18%)
TPR 2 73..112 7/38 (18%)
TPR 3 114..144 6/31 (19%)
TPR 4 169..200 7/30 (23%)
TPR 5 229..259 6/32 (19%)
Spy 234..>405 CDD:443119 32/181 (18%)
TPR 6 263..293 6/29 (21%)
TPR 7 297..327 7/29 (24%)
TPR 325..>495 CDD:440225 39/228 (17%)
TPR 8 331..361 5/29 (17%)
TPR repeat 331..359 CDD:276809 4/27 (15%)
TPR 9 366..395 7/36 (19%)
TPR repeat 367..393 CDD:276809 7/33 (21%)
TPR repeat 398..428 CDD:276809 3/29 (10%)
TPR 10 400..432 5/32 (16%)
TPR 11 433..466 11/80 (14%)
TPR repeat 433..461 CDD:276809 9/75 (12%)
TPR repeat 467..495 CDD:276809 9/29 (31%)
TPR 12 468..500 8/39 (21%)
TPR repeat 501..536 CDD:276809 4/38 (11%)
TPR 13 504..540 4/39 (10%)

Return to query results.
Submit another query.