DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment AlaRS and aars-2

DIOPT Version :9

Sequence 1:NP_523511.2 Gene:AlaRS / 34156 FlyBaseID:FBgn0027094 Length:966 Species:Drosophila melanogaster
Sequence 2:NP_491281.1 Gene:aars-2 / 171985 WormBaseID:WBGene00000197 Length:968 Species:Caenorhabditis elegans


Alignment Length:980 Identity:544/980 - (55%)
Similarity:708/980 - (72%) Gaps:26/980 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKLLTAKEVRNAYLDFFKEQK-HIYVHSSSTIPLDDPTLLFANAGMNQFKPIFLGTADPNSEMSK 64
            ||.|||.|||:.:::||:|:| |.||||||.||.|||||||||||||||||:|||.|||||:::|
 Worm     1 MKHLTASEVRSTFINFFREKKEHTYVHSSSVIPHDDPTLLFANAGMNQFKPLFLGIADPNSDLAK 65

  Fly    65 WVRVANTQKCIRAGGKHNDLDDVGKDVYHHTFFEMLGNWSFGDYFKKEICSWAWEFLTQRLALPK 129
            ..|..||||||||||||||||||||||||||:|||||||||||||||||.:||||.||....:|.
 Worm    66 LKRAVNTQKCIRAGGKHNDLDDVGKDVYHHTYFEMLGNWSFGDYFKKEIITWAWELLTTVYGIPA 130

  Fly   130 DRLYVTYFGGDAASGLEPDLECKQMWLDLGLKPEHILPGSMKDNFWEMGETGPCGPCSELHFDRI 194
            :||||:.||||.|:|:..|.|.:.:|..:|:..|.||...|||||||||:.||||||||:|:|||
 Worm   131 ERLYVSVFGGDEANGVPADSEARDIWRSVGVPDERILNFGMKDNFWEMGDVGPCGPCSEIHYDRI 195

  Fly   195 GGRSVPELVNMDDPDVLEIWNLVFIQYNRESDGSLKQLPKKHIDCGMGFERLVSVIQNKRSNYDT 259
            |.|....|||.|||.|:|||||||||:|||..|.||.||.||||||:|.|||::|:|:|.|||||
 Worm   196 GNRDASHLVNADDPMVVEIWNLVFIQFNREEGGVLKPLPAKHIDCGLGLERLIAVMQDKTSNYDT 260

  Fly   260 DLFVPLFDAIQAGTGAPPYQGRVGADDVDGIDMAYRVLADHARTITIALADGGTPDNTGRGYVLR 324
            |:|.|:|:||..|:|...|.|.:|.:|.||:||||||:|||.||:||||:|||.|||:|||||||
 Worm   261 DIFQPIFEAIHKGSGVRAYTGFIGDEDKDGVDMAYRVVADHVRTLTIALSDGGRPDNSGRGYVLR 325

  Fly   325 RILRRAVRYATEKLNAKPGFFATLVNTVVDLLGDAFPEVKKDPQHIIDIINEEELQFLKTLTRGR 389
            |||||.||||:|||||:|||||:||..|:.:||:.|||:.:||..::||||:||.||||||:|||
 Worm   326 RILRRGVRYASEKLNAQPGFFASLVPVVISILGETFPELSRDPVTVMDIINDEEKQFLKTLSRGR 390

  Fly   390 NLLNRTIEKLGNQT-TIPGDVAWRLYDTYGFPVDLTQLMAEEKSLKIDMDGYEAAKHNSYVLSQG 453
            .|..|.::.|...| |.||||:||||||||||.||||||||||.|.:|...:|.|:..: :.:..
 Worm   391 VLFQRAVQSLPEGTMTFPGDVSWRLYDTYGFPADLTQLMAEEKGLSVDNTAFEEARRKA-IETSS 454

  Fly   454 KGASKIEE-INLDVHAISQLQEQGVPPTNDTFKYKYEAVSDERDSAYNYGVCNSKIVALRFENQF 517
            .|..|..: ::|||||:::||::|||.|:|:.||.|....:..|:.|.:..|..||:|:|.:.:|
 Worm   455 AGTGKFRDTLDLDVHALAELQQKGVPTTDDSPKYAYTFTGEGSDAVYKFEPCVGKILAIRRDGKF 519

  Fly   518 VNEITSGQKAGIVLDKTNFYAESGGQIYDQGALVKVNDEANEFLVDRVYNRGGYILHIGVVEGTL 582
            |:::.:|::..|:||:||||||.||||||.|.|.|||||:|||.|.....|||||:.:|..||:.
 Worm   520 VDQLAAGEEGAILLDRTNFYAEQGGQIYDVGVLTKVNDESNEFNVSNCQVRGGYIVLVGSAEGSF 584

  Fly   583 KVGDELELHIDVERRWLTMKNHSATHALNHCLLQVLGKDTEQKGSLVVPEKLRFDFNSKAAMTIE 647
            .|||::....|.:|:.|.||||:.||.||:.|.:||. |::||||||.|:::||||.:||.||::
 Worm   585 SVGDQVNERFDEDRKQLIMKNHTGTHVLNYALRKVLA-DSDQKGSLVAPDRMRFDFTNKAGMTVQ 648

  Fly   648 QVSKTEQLTKEMVYKNVPIYAKESKLALAKKIRGLRSVFDEVYPDPVRVISFGVPVDELEQNPDS 712
            ||.|.|:..::::.....:|||.|.|..|||::|||::|||.|||||||::.|.||::|.||||:
 Worm   649 QVKKAEEYAQQLIDTKGQVYAKNSPLGEAKKVKGLRAMFDETYPDPVRVVAVGTPVEQLLQNPDA 713

  Fly   713 EAGEQTSVEFCGGTHLRRSGHIMDFVISSEEAIAKGIRRIVALTGPEALKALKKSEAFEQEIVRL 777
            |.|:.|:|||||||||:...||...||:||||||||||||||||||||.:|:.:::       ||
 Worm   714 EEGQNTTVEFCGGTHLQNVSHIGRIVIASEEAIAKGIRRIVALTGPEAERAIARAD-------RL 771

  Fly   778 KATIDNDKSGKDSKSHV-----------KEIVELTEQISHATIPYVKKDEMRNLLKGLKKTLDDK 831
            .|.::.:....|.|..:           |:|.|:.::.:.|.:||.:||.:|...|.::||||..
 Worm   772 TARLEEESKHADKKDELLANKDKFKALQKKIQEIVDEANGAQLPYWRKDSIREKAKAIQKTLDGY 836

  Fly   832 ERALRAAVSVTVVERAKTLCEANPNATVLVEQLEAFNNTKALDAALKQVRSQLPDAAAMFLSVDA 896
            .:|.:|||:..|:..||.|.......||||....|..|:||:|.|||.::.   ..|.|..||:.
 Worm   837 TKAQQAAVAEKVLGEAKELAAVAEQPTVLVHVFAANANSKAIDNALKLLKD---TKAVMAFSVNE 898

  Fly   897 DSKKIFCLSSVPKSAVEKGLKANEWVQHVSATLGGKGGGKPESAQASGTNYEKVDEIVQLASKFA 961
            ||.|:.||:.|.||.|..||||||||..|...||||||||..:||.:|.|.:|:|..|:||.|||
 Worm   899 DSGKVLCLAKVDKSLVSNGLKANEWVNEVCTVLGGKGGGKDANAQLTGENVDKLDAAVELAQKFA 963

  Fly   962 QSKLS 966
            .:.::
 Worm   964 LAAIN 968

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
AlaRSNP_523511.2 PLN02900 5..963 CDD:215487 541/971 (56%)
AlaRS_core 6..253 CDD:238360 170/247 (69%)
tRNA_SAD 529..>626 CDD:298782 53/96 (55%)
tRNA_SAD 694..752 CDD:285247 37/57 (65%)
DHHA1 888..957 CDD:280440 37/68 (54%)
aars-2NP_491281.1 PLN02900 5..965 CDD:215487 541/971 (56%)
AlaRS_core 6..254 CDD:238360 170/247 (69%)
tRNA_SAD 530..754 CDD:298782 127/224 (57%)
DHHA1 892..961 CDD:280440 38/68 (56%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160386
Domainoid 1 1.000 755 1.000 Domainoid score I34
eggNOG 1 0.900 - - E1_COG0013
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H1213
Inparanoid 1 1.050 1099 1.000 Inparanoid score I122
Isobase 1 0.950 - 0 Normalized mean entropy S431
OMA 1 1.010 - - QHG60684
OrthoDB 1 1.010 - - D129373at2759
OrthoFinder 1 1.000 - - FOG0001295
OrthoInspector 1 1.000 - - oto17986
orthoMCL 1 0.900 - - OOG6_100414
Panther 1 1.100 - - LDO PTHR11777
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1429
SonicParanoid 1 1.000 - - X999
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1716.790

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