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Protein Alignment CG17294 and Hdhd2

DIOPT Version :9

Sequence 1:	NP_609219.1	Gene:	CG17294 / 34155	FlyBaseID:	FBgn0032032	Length:	255	Species:	Drosophila melanogaster
Sequence 2:	NP_001034290.1	Gene:	Hdhd2 / 76987	MGIID:	1924237	Length:	259	Species:	Mus musculus

Alignment Length:	254	Identity:	125/254 - (49%)
Similarity:	172/254 - (67%)	Gaps:	7/254 - (2%)

- Green bases have known domain annotations that are detailed below.

  Fly     2 SIKGALIDLSGTLHVEDEPTPNAVEALKRLRDSGVLVKFVTNTTKDSKATLHERLCRIGFQLDAS 66
            ::|..|:||:||||:||...|.|.|||||||.:.|:|:|||||||:||..|.|||.::.|::...
Mouse     6 ALKAVLVDLNGTLHIEDAAVPGAQEALKRLRATSVMVRFVTNTTKESKKDLLERLKKLEFEISED 70

  Fly    67 EIYSSLSAAVSYVENERLNPYYILSEDARQDFPPEDTRRYKDSVVIGLAPKAFNYEQLNEAFNVL 131
            ||::||:||.:.:|.:::.|..::.:.|..:|....|:. .::|||||||:.|:|:.||:||.:|
Mouse    71 EIFTSLTAARNLIEQKQVRPMLLVDDRALPEFTGVQTQD-PNAVVIGLAPEHFHYQLLNQAFRLL 134

  Fly   132 LENKNHKLIAVHQGKYYKRAEGLALGPGCFVKGLEFATGRTAKVIGKPNPYFFEGALAGRD--PA 194
            |:..  .|||:|:.:||||.:|||||||.||..||:||...|.|:|||...||..||...|  |.
Mouse   135 LDGA--PLIAIHKARYYKRKDGLALGPGPFVTALEYATDTKAMVVGKPEKTFFLEALRDADCAPE 197

  Fly   195 SCVMIGDDANDDIVGAMSMGMQGILVKTGKY--LPDVKPSPPPTALLENFAEAVDWIIQ 251
            ..||||||..||:.||.::||.|||||||||  ..:.|.:|||....|:|..|||.|:|
Mouse   198 EAVMIGDDCRDDVDGAQNIGMLGILVKTGKYKAADEEKINPPPYLTCESFPHAVDHILQ 256

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.