DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17294 and pgph-3

DIOPT Version :9

Sequence 1:NP_609219.1 Gene:CG17294 / 34155 FlyBaseID:FBgn0032032 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_504511.1 Gene:pgph-3 / 178964 WormBaseID:WBGene00016892 Length:349 Species:Caenorhabditis elegans


Alignment Length:270 Identity:54/270 - (20%)
Similarity:99/270 - (36%) Gaps:72/270 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LIDLSGTLHVEDEPTPNAVEALKRLRDSGVLVKFVTNTTKDSKATLHERLCRIGF---QLDASEI 68
            :.|..|.|.:.:...|.:...:..|......:..:||....|:|...::|.::|:   :::.:.:
 Worm    60 IFDADGVLWLGESVMPGSPRLIDYLVKHNKQIIVLTNNATKSRAVYAKKLAKLGYNSSKMNKNNL 124

  Fly    69 YSSLSAAVSYVENERLN--PYYILSEDARQD-----------FPPEDTRRYKD------------ 108
            .:..:.....:....|:  ..|::.|...:|           ..||..:...|            
 Worm   125 VNPAAVVADTLHRAGLDGKRVYLIGEQGLRDEMDELGIEYFGHGPEKKQDEADGSGAFMYDIKLE 189

  Fly   109 ----SVVIGLAPKAFNYEQLNEAFNVLLENKNHKLIAVHQGKYYKRAEGLAL----------GP- 158
                :||:|. .|.|:|.::.:|.|                  |.|.||:..          || 
 Worm   190 ENVGAVVVGY-EKHFDYVKMMKASN------------------YLREEGVLFVATNEDETCPGPN 235

  Fly   159 --------GCFVKGLEFATGRTAKVIGKP-NPYF-FEGALAGRDPASCVMIGDDANDDIVGAMSM 213
                    |..|..::.|:||....:||| .|.| :.......:|:..:||||..|.|:......
 Worm   236 PEVVIPDAGPIVAAIKCASGRDPLTVGKPCTPAFNYIKRKWNINPSRTMMIGDRTNTDVKFGRDH 300

  Fly   214 GMQGILVKTG 223
            ||:.:||.:|
 Worm   301 GMKTLLVLSG 310

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17294NP_609219.1 HAD-SF-IIA-hyp3 3..251 CDD:162372 54/270 (20%)
Hydrolase_6 7..98 CDD:290083 15/106 (14%)
DUF843 <84..136 CDD:114536 15/80 (19%)
Hydrolase_like 175..245 CDD:289983 17/51 (33%)
pgph-3NP_504511.1 PGP_euk 55..340 CDD:273635 54/270 (20%)
Hydrolase_6 59..163 CDD:290083 15/102 (15%)
Hydrolase_like 261..340 CDD:289983 17/50 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0647
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.