DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17294 and pgph-3

DIOPT Version :10

Sequence 1:NP_609219.1 Gene:CG17294 / 34155 FlyBaseID:FBgn0032032 Length:255 Species:Drosophila melanogaster
Sequence 2:NP_504511.1 Gene:pgph-3 / 178964 WormBaseID:WBGene00016892 Length:349 Species:Caenorhabditis elegans


Alignment Length:77 Identity:14/77 - (18%)
Similarity:25/77 - (32%) Gaps:18/77 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 LGLVINPTNK--SW------PCRICGSCAEKVKEFHKYRELCWDVHNMLLNVLNGENTVDTQNGK 88
            |.|...|.:|  .|      |..|...|.....:..|.:|          .::...:.:....||
 Worm    26 LQLTKRPKSKVFLWRTLRRRPKGIVEICPRDAYQLTKKQE----------GIIKSIHMIVRDRGK 80

  Fly    89 STIKKVMKKDNE 100
            ..::..:||..:
 Worm    81 FIMELYLKKSGK 92

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17294NP_609219.1 HAD_PPase 4..250 CDD:319812 14/77 (18%)
pgph-3NP_504511.1 PGP_euk 55..340 CDD:273635 6/48 (13%)

Return to query results.
Submit another query.