DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG13390 and 128up

DIOPT Version :10

Sequence 1:NP_609218.1 Gene:CG13390 / 34154 FlyBaseID:FBgn0032031 Length:381 Species:Drosophila melanogaster
Sequence 2:NP_536733.1 Gene:128up / 36288 FlyBaseID:FBgn0010339 Length:368 Species:Drosophila melanogaster


Alignment Length:234 Identity:71/234 - (30%)
Similarity:98/234 - (41%) Gaps:40/234 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   148 GQIVGDLGQADLMFVAARGGAGGKGNRFFTTDKETSPKVSEYGPRGEDLSYTLELRSMADVGLIG 212
            |.:...|.:.....::.:||.||.|...|           |....|:           |.||.:|
  Fly    29 GLLKAKLAKLRRELISPKGGGGGTGEAGF-----------EVAKTGD-----------ARVGFVG 71

  Fly   213 YPNAGKSTLLNALTRAKPKVAPYAFTTLRPHLGTVQYDDHVQLTIADLPGLVPDAHRNKGLGIQF 277
            :|:.||||||:.|.....:||.|.||||....|.::|.. .::.:.||||::..|...||.|.|.
  Fly    72 FPSVGKSTLLSNLAGVYSEVAAYEFTTLTTVPGCIKYKG-AKIQLLDLPGIIEGAKDGKGRGRQV 135

  Fly   278 LKHAERCTLLLFVLDASAPEPWTHYEQLMHELRQFGGRLASRPQLVVANKLDVEEGQNNF----- 337
            :..|..|.|:..|||..  :|..|.:.|.|||..||.||..:|..:...:.|  :|..|.     
  Fly   136 IAVARTCNLIFMVLDCL--KPLGHKKLLEHELEGFGIRLNKKPPNIYYKRKD--KGGINLNSMVP 196

  Fly   338 -EELQRRLQNPVLGISAKMGHNLGQLLNSIRRGYDRHKD 375
             .||...|...:|  |....||.     .|...||...|
  Fly   197 QSELDTDLVKTIL--SEYKIHNA-----DITLRYDATSD 228

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13390NP_609218.1 Obg_CgtA 52..366 CDD:274271 67/223 (30%)
128upNP_536733.1 Rbg1 1..367 CDD:440777 71/234 (30%)

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