DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdr82 and AT5G66240

DIOPT Version :9

Sequence 1:NP_609217.1 Gene:Wdr82 / 34153 FlyBaseID:FBgn0032030 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_569031.1 Gene:AT5G66240 / 836756 AraportID:AT5G66240 Length:331 Species:Arabidopsis thaliana


Alignment Length:314 Identity:126/314 - (40%)
Similarity:192/314 - (61%) Gaps:8/314 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKIKLIDSVVRSFKVAKIFRENTDKINAIDFAPNGEHLISCSEDDQIVIYDCEKGTQSRTVNSKK 65
            :.::|.:.:::|.:...:||:...:|::|||......:::.|:||.|.:||....|..:|:||||
plant    11 VSLELSEEIIQSMEPGAVFRDYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTINSKK 75

  Fly    66 YGVDLIHFTHANNTAIHSSTK-VDDTIRYLSLHDNKYLRYFPGHTKKVISLCISPVEDTFLSGSL 129
            |||||:.||....|.|:||.. .||::|.||||||||||||.||..:|:||.:....:.|:||||
plant    76 YGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGGECFISGSL 140

  Fly   130 DKTLRLWDLRSPNCQGLMHLSGRPIAAYDPEGLIFAAGVNSESIKLYDLRSFDKGPFVTFKLNQE 194
            |:|:.|||.|...||||:.:.|||.||||.:|||||..... .|:::|.|.::||||..|.:..:
plant   141 DRTVLLWDQRVEKCQGLLRVQGRPAAAYDDQGLIFAIAFGG-YIRMFDARMYEKGPFEIFSVGGD 204

  Fly   195 KECDWTGLKFSRDGKTILISTNGSVIRLVDAFHGTPLQTFTGYPNNKGIPIEASFSPDSQFIFSG 259
            .. :...:|||.||:.:|::|....|.::|:|.||.|.||:..|......::|:|||:..|:.||
plant   205 LS-EANVVKFSNDGRLMLLTTMDGFIHVLDSFRGTLLSTFSVKPVAGESTLDAAFSPEGMFVVSG 268

  Fly   260 STDGRVHIWNADTGNKV-SVLN-GDHPGPVQCVQFNPKYMMLASACTNMAFWLP 311
            |.||..|.|...:|.:| |.:. |..| ||  :::.|...|..:..:.:||.:|
plant   269 SGDGSTHAWGVRSGKQVHSWMGLGSEP-PV--IKWGPGSPMFVTGSSELAFVIP 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr82NP_609217.1 WD40 17..302 CDD:238121 121/287 (42%)
WD40 repeat 26..63 CDD:293791 12/36 (33%)
WD40 repeat 69..107 CDD:293791 23/38 (61%)
WD40 repeat 112..150 CDD:293791 18/37 (49%)
WD40 repeat 155..192 CDD:293791 17/36 (47%)
WD40 repeat 199..235 CDD:293791 14/35 (40%)
WD40 repeat 243..280 CDD:293791 15/37 (41%)
WD40 repeat 287..309 CDD:293791 4/21 (19%)
AT5G66240NP_569031.1 WD40 3..>313 CDD:225201 123/306 (40%)
WD40 27..312 CDD:295369 121/289 (42%)
WD40 repeat 36..73 CDD:293791 12/36 (33%)
WD40 repeat 79..118 CDD:293791 23/38 (61%)
WD40 repeat 123..158 CDD:293791 17/34 (50%)
WD40 repeat 164..200 CDD:293791 17/36 (47%)
WD40 repeat 208..244 CDD:293791 14/35 (40%)
WD40 repeat 253..290 CDD:293791 15/36 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 86 1.000 Domainoid score I2800
eggNOG 1 0.900 - - E1_KOG1446
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H42951
Inparanoid 1 1.050 250 1.000 Inparanoid score I1029
OMA 1 1.010 - - QHG54522
OrthoDB 1 1.010 - - D1146727at2759
OrthoFinder 1 1.000 - - FOG0002456
OrthoInspector 1 1.000 - - otm2833
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR19861
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1869
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1413.940

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