DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdr82 and AT5G14530

DIOPT Version :10

Sequence 1:NP_609217.1 Gene:Wdr82 / 34153 FlyBaseID:FBgn0032030 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_196957.1 Gene:AT5G14530 / 831304 AraportID:AT5G14530 Length:330 Species:Arabidopsis thaliana


Alignment Length:316 Identity:124/316 - (39%)
Similarity:201/316 - (63%) Gaps:7/316 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KLIDSVVRSFKVAKIFRENTDKINAIDFAPNGEHLISCSEDDQIVIYDCEKGTQSRTVNSKKYGV 68
            :|.|.:||...:..:|.:...||:::.|....:.|::.||||.:.::|.....|.:....||:|.
plant     5 ELDDGLVRRMAMGAVFSDFGGKIHSVGFHRTDDLLVTSSEDDSLRLFDIANAKQLKITYHKKHGT 69

  Fly    69 DLIHFTHANNTAIHSS----TKVDDTIRYLSLHDNKYLRYFPGHTKKVISLCISPVEDTFLSGSL 129
            |.:.|||..::.|.||    ....:::||||::||:.||||.||..:|:|||:||:.|:|:||||
plant    70 DRVCFTHHPSSLICSSRYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSLCMSPINDSFMSGSL 134

  Fly   130 DKTLRLWDLRSPNCQGLMHLSGRPIAAYDPEGLIFAAGVNSESIKLYDLRSFDKGPFVTFKLNQE 194
            |:::||||||...|||::||.|||..|||.:||:||..:...::||:|.|.:|||||.||.:..:
plant   135 DRSVRLWDLRVNACQGILHLRGRPAVAYDQQGLVFAIAMEGGAVKLFDSRCYDKGPFDTFLVGGD 199

  Fly   195 KECDWTGLKFSRDGKTILISTNGSVIRLVDAFHGTPLQTFTGYPNNKGIPIEASFSPDSQFIFSG 259
             ..:...:|||.|||::|::|..:.|.::||:.|.....|:..| ::|.||||:|:||.:::.||
plant   200 -TAEVNDIKFSNDGKSMLLTTTNNNIYVLDAYRGEKKCGFSLEP-SQGTPIEATFTPDGKYVLSG 262

  Fly   260 STDGRVHIWNADTGNKVSVLNGDHPGPVQCVQFNPKYMMLASACTNMAFWLPTSEE 315
            |.||.:|.||.:..::|:... ::.|.|.|:::.|:..|..:|.|.:.||:|...|
plant   263 SGDGTLHAWNIENPSEVARWE-NNIGVVSCLKWAPRRAMFVAASTVLTFWIPNDGE 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr82NP_609217.1 WD40 <14..303 CDD:441893 114/292 (39%)
WD40 repeat 26..63 CDD:293791 9/36 (25%)
WD40 repeat 69..107 CDD:293791 17/41 (41%)
WD40 repeat 112..150 CDD:293791 23/37 (62%)
WD40 repeat 155..192 CDD:293791 18/36 (50%)
WD40 repeat 199..235 CDD:293791 12/35 (34%)
WD40 repeat 243..280 CDD:293791 16/36 (44%)
WD40 repeat 287..309 CDD:293791 6/21 (29%)
AT5G14530NP_196957.1 WD40 <18..305 CDD:441893 114/289 (39%)
WD40 repeat 27..63 CDD:293791 9/35 (26%)
WD40 repeat 69..112 CDD:293791 17/42 (40%)
WD40 repeat 117..152 CDD:293791 22/34 (65%)
WD40 repeat 158..196 CDD:293791 19/37 (51%)
WD40 repeat 203..239 CDD:293791 12/35 (34%)
WD40 repeat 247..279 CDD:293791 15/31 (48%)
WD40 repeat 289..311 CDD:293791 6/21 (29%)

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