DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdr82 and Wdr82

DIOPT Version :10

Sequence 1:NP_609217.1 Gene:Wdr82 / 34153 FlyBaseID:FBgn0032030 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_001258235.1 Gene:Wdr82 / 686295 RGDID:1584269 Length:313 Species:Rattus norvegicus


Alignment Length:313 Identity:216/313 - (69%)
Similarity:269/313 - (85%) Gaps:0/313 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IKLIDSVVRSFKVAKIFRENTDKINAIDFAPNGEHLISCSEDDQIVIYDCEKGTQSRTVNSKKYG 67
            :||.|||:|||:|||:||||:||||..||:||||.:||.|:||.||:|||::|...||:.|||||
  Rat     1 MKLTDSVLRSFRVAKVFRENSDKINCFDFSPNGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYG 65

  Fly    68 VDLIHFTHANNTAIHSSTKVDDTIRYLSLHDNKYLRYFPGHTKKVISLCISPVEDTFLSGSLDKT 132
            ||||.:|||.||.::||.|:||||||||||||||:||||||:|:|::|.:|||:|||:|||||||
  Rat    66 VDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSLDKT 130

  Fly   133 LRLWDLRSPNCQGLMHLSGRPIAAYDPEGLIFAAGVNSESIKLYDLRSFDKGPFVTFKLNQEKEC 197
            :||||||||||||||||.|:|:.::||||||||||||||.:|||||||||||||.|||:..::.|
  Rat   131 IRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTC 195

  Fly   198 DWTGLKFSRDGKTILISTNGSVIRLVDAFHGTPLQTFTGYPNNKGIPIEASFSPDSQFIFSGSTD 262
            :|||||||.|||.||||||||.|||:|||.|..:.||.||.|:|.:.:||||:||||||..||.|
  Rat   196 EWTGLKFSNDGKLILISTNGSFIRLIDAFKGVVMHTFGGYANSKAVTLEASFTPDSQFIMIGSED 260

  Fly   263 GRVHIWNADTGNKVSVLNGDHPGPVQCVQFNPKYMMLASACTNMAFWLPTSEE 315
            |::|:||.::|.||:||:|.|.||:.|:|||||:|..||||:||||||||.::
  Rat   261 GKIHVWNGESGIKVAVLDGKHTGPITCLQFNPKFMTFASACSNMAFWLPTIDD 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr82NP_609217.1 WD40 <14..303 CDD:441893 198/288 (69%)
WD40 repeat 26..63 CDD:293791 21/36 (58%)
WD40 repeat 69..107 CDD:293791 28/37 (76%)
WD40 repeat 112..150 CDD:293791 30/37 (81%)
WD40 repeat 155..192 CDD:293791 30/36 (83%)
WD40 repeat 199..235 CDD:293791 26/35 (74%)
WD40 repeat 243..280 CDD:293791 21/36 (58%)
WD40 repeat 287..309 CDD:293791 14/21 (67%)
Wdr82NP_001258235.1 WD40 repeat 24..61 CDD:293791 21/36 (58%)
WD40 repeat 67..105 CDD:293791 28/37 (76%)
WD40 repeat 110..148 CDD:293791 30/37 (81%)
WD40 repeat 153..190 CDD:293791 30/36 (83%)
WD40 repeat 197..233 CDD:293791 26/35 (74%)
WD40 repeat 241..282 CDD:293791 23/40 (58%)
WD40 repeat 285..307 CDD:293791 14/21 (67%)
WD40 <12..302 CDD:441893 199/289 (69%)

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