DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Wdr82 and wdr82

DIOPT Version :10

Sequence 1:NP_609217.1 Gene:Wdr82 / 34153 FlyBaseID:FBgn0032030 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_001004854.1 Gene:wdr82 / 448141 XenbaseID:XB-GENE-1003225 Length:313 Species:Xenopus tropicalis


Alignment Length:313 Identity:209/313 - (66%)
Similarity:265/313 - (84%) Gaps:0/313 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IKLIDSVVRSFKVAKIFRENTDKINAIDFAPNGEHLISCSEDDQIVIYDCEKGTQSRTVNSKKYG 67
            :||.|:|:|||:|||:||||:||||..||:|.||.:||.|:||.||:|||::|...||:.|||||
 Frog     1 MKLTDNVLRSFRVAKVFRENSDKINCFDFSPTGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYG 65

  Fly    68 VDLIHFTHANNTAIHSSTKVDDTIRYLSLHDNKYLRYFPGHTKKVISLCISPVEDTFLSGSLDKT 132
            ||||.:|||.||.::||.|:||||||||||||||:||||||:|:|::|.:|||:|||:|||||||
 Frog    66 VDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHSKRVVALSMSPVDDTFISGSLDKT 130

  Fly   133 LRLWDLRSPNCQGLMHLSGRPIAAYDPEGLIFAAGVNSESIKLYDLRSFDKGPFVTFKLNQEKEC 197
            :||||||||||||||||.|:|:.::||||||||||||||.:|||||||||||||.|||:..::.|
 Frog   131 IRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKMQYDRTC 195

  Fly   198 DWTGLKFSRDGKTILISTNGSVIRLVDAFHGTPLQTFTGYPNNKGIPIEASFSPDSQFIFSGSTD 262
            :||.||||.|||.||:||||..:||||||.|..:.||.||.|:|.:.:||:|:||||||..||.|
 Frog   196 EWTALKFSNDGKLILMSTNGGFLRLVDAFKGAVMHTFGGYNNSKAVTLEATFTPDSQFIMIGSED 260

  Fly   263 GRVHIWNADTGNKVSVLNGDHPGPVQCVQFNPKYMMLASACTNMAFWLPTSEE 315
            |::|:||.::|.||:||:|.|.||:.|:|||||:|...|||:||||||||.::
 Frog   261 GKIHVWNCESGMKVAVLDGKHTGPITCLQFNPKFMTFTSACSNMAFWLPTIDD 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr82NP_609217.1 WD40 <14..303 CDD:441893 192/288 (67%)
WD40 repeat 26..63 CDD:293791 20/36 (56%)
WD40 repeat 69..107 CDD:293791 28/37 (76%)
WD40 repeat 112..150 CDD:293791 30/37 (81%)
WD40 repeat 155..192 CDD:293791 30/36 (83%)
WD40 repeat 199..235 CDD:293791 23/35 (66%)
WD40 repeat 243..280 CDD:293791 20/36 (56%)
WD40 repeat 287..309 CDD:293791 13/21 (62%)
wdr82NP_001004854.1 WD40 <5..292 CDD:441893 192/286 (67%)
WD 1 19..58 22/38 (58%)
WD40 repeat 24..61 CDD:293791 20/36 (56%)
WD40 repeat 67..105 CDD:293791 28/37 (76%)
WD 2 105..144 29/38 (76%)
WD40 repeat 110..148 CDD:293791 30/37 (81%)
WD 3 146..184 29/37 (78%)
WD40 repeat 153..190 CDD:293791 30/36 (83%)
WD 4 192..231 23/38 (61%)
WD40 repeat 197..233 CDD:293791 23/35 (66%)
WD 5 236..276 21/39 (54%)
WD40 repeat 241..282 CDD:293791 22/40 (55%)
WD 6 280..313 21/32 (66%)

Return to query results.
Submit another query.