DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdr82 and CG3515

DIOPT Version :9

Sequence 1:NP_609217.1 Gene:Wdr82 / 34153 FlyBaseID:FBgn0032030 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_608687.2 Gene:CG3515 / 33437 FlyBaseID:FBgn0031431 Length:395 Species:Drosophila melanogaster


Alignment Length:312 Identity:113/312 - (36%)
Similarity:175/312 - (56%) Gaps:2/312 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKIKLIDSVVRSFKVAKIFRENTDKINAIDFAPNGEHLISCSEDDQIVIYDCEKGTQSRTVNSKK 65
            |.|:|.|..:|.|:|||:|.|......|::|:.:|..|:.| :...:.|:...:..|...|....
  Fly     1 MSIRLNDDAMRQFRVAKVFPETKHHTLAMEFSSDGLRLLVC-DHSALSIFSSTRQVQVCKVPMHH 64

  Fly    66 YGVDLIHFTHANNTAIHSSTKVDDTIRYLSLHDNKYLRYFPGHTKKVISLCISP-VEDTFLSGSL 129
            |..|:..|...:...:||::|.|.|||.|.|:....:|.|.||.|.:..|...| .|:.|:|...
  Fly    65 YLPDVACFVQQDTRVLHSTSKHDYTIRCLDLNTRHCVRVFGGHAKTINRLASQPGGENVFISAGR 129

  Fly   130 DKTLRLWDLRSPNCQGLMHLSGRPIAAYDPEGLIFAAGVNSESIKLYDLRSFDKGPFVTFKLNQE 194
            |..:.:||:|.......:....||:.|:|||||..|....:|.|::.|:|.....|...|.....
  Fly   130 DDQVYMWDIRVKTHTHRIKNLRRPLCAFDPEGLFLATSSGTEGIQIRDVRMMGGEPSRKFVYQVN 194

  Fly   195 KECDWTGLKFSRDGKTILISTNGSVIRLVDAFHGTPLQTFTGYPNNKGIPIEASFSPDSQFIFSG 259
            .:.:||.|:|:.:||::|:||:.|....|.|..||..|:||||.|...:|::|:::||||||.||
  Fly   195 AKANWTQLQFAPNGKSLLLSTDHSWCFSVSAIDGTYQQSFTGYSNKLRLPLDATYTPDSQFILSG 259

  Fly   260 STDGRVHIWNADTGNKVSVLNGDHPGPVQCVQFNPKYMMLASACTNMAFWLP 311
            :..||:|||.|..|..|:||.|::.|||:|::|||:..|..|:.:.:.||:|
  Fly   260 ADKGRIHIWRAADGFPVAVLKGNNMGPVRCMRFNPRATMFVSSDSRIVFWMP 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr82NP_609217.1 WD40 17..302 CDD:238121 101/285 (35%)
WD40 repeat 26..63 CDD:293791 8/36 (22%)
WD40 repeat 69..107 CDD:293791 13/37 (35%)
WD40 repeat 112..150 CDD:293791 9/38 (24%)
WD40 repeat 155..192 CDD:293791 13/36 (36%)
WD40 repeat 199..235 CDD:293791 15/35 (43%)
WD40 repeat 243..280 CDD:293791 19/36 (53%)
WD40 repeat 287..309 CDD:293791 7/21 (33%)
CG3515NP_608687.2 WD40 28..309 CDD:295369 99/281 (35%)
WD40 repeat 28..62 CDD:293791 8/34 (24%)
WD40 <31..309 CDD:225201 98/278 (35%)
WD40 repeat 67..106 CDD:293791 13/38 (34%)
WD40 repeat 111..151 CDD:293791 9/39 (23%)
WD40 repeat 155..194 CDD:293791 13/38 (34%)
WD40 repeat 200..235 CDD:293791 14/34 (41%)
WD40 repeat 245..280 CDD:293791 18/34 (53%)
WD40 repeat 287..309 CDD:293791 7/21 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45446729
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1446
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 180 1.000 Inparanoid score I962
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1146727at2759
OrthoFinder 1 1.000 - - FOG0002456
OrthoInspector 1 1.000 - - otm46744
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR19861
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1869
98.900

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