DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdr82 and wdr82

DIOPT Version :9

Sequence 1:NP_609217.1 Gene:Wdr82 / 34153 FlyBaseID:FBgn0032030 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_001159740.1 Gene:wdr82 / 321614 ZFINID:ZDB-GENE-030131-333 Length:313 Species:Danio rerio


Alignment Length:313 Identity:215/313 - (68%)
Similarity:268/313 - (85%) Gaps:0/313 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 IKLIDSVVRSFKVAKIFRENTDKINAIDFAPNGEHLISCSEDDQIVIYDCEKGTQSRTVNSKKYG 67
            :||.|||:|||:|||:||||:||||..||:.|||.:||.|:||.||:|||::|...||:.|||||
Zfish     1 MKLTDSVLRSFRVAKVFRENSDKINCFDFSSNGETVISSSDDDSIVLYDCQEGKPKRTLYSKKYG 65

  Fly    68 VDLIHFTHANNTAIHSSTKVDDTIRYLSLHDNKYLRYFPGHTKKVISLCISPVEDTFLSGSLDKT 132
            ||||.:|||.||.::||.|:||||||||||||||:||||||.|:|::|.:|||:|||:|||||||
Zfish    66 VDLIRYTHAANTVVYSSNKIDDTIRYLSLHDNKYIRYFPGHNKRVVALSMSPVDDTFISGSLDKT 130

  Fly   133 LRLWDLRSPNCQGLMHLSGRPIAAYDPEGLIFAAGVNSESIKLYDLRSFDKGPFVTFKLNQEKEC 197
            :||||||||||||||||.|:|:.::||||||||||||||.:|||||||||||||.||||..|:.|
Zfish   131 IRLWDLRSPNCQGLMHLQGKPVCSFDPEGLIFAAGVNSEMVKLYDLRSFDKGPFATFKLQYERTC 195

  Fly   198 DWTGLKFSRDGKTILISTNGSVIRLVDAFHGTPLQTFTGYPNNKGIPIEASFSPDSQFIFSGSTD 262
            :|||||||.|||.||:||||..:|::|||.|..|.:|.||.|:||:.:||||:||||||..||.|
Zfish   196 EWTGLKFSNDGKLILVSTNGGTLRVLDAFKGAVLHSFGGYNNSKGVILEASFTPDSQFIMIGSED 260

  Fly   263 GRVHIWNADTGNKVSVLNGDHPGPVQCVQFNPKYMMLASACTNMAFWLPTSEE 315
            |::|:|||::|.||::|:|.|.|||.|:|||||:|..||||:||||||||.::
Zfish   261 GKIHVWNAESGMKVALLDGKHTGPVTCLQFNPKFMTFASACSNMAFWLPTIDD 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr82NP_609217.1 WD40 17..302 CDD:238121 194/284 (68%)
WD40 repeat 26..63 CDD:293791 20/36 (56%)
WD40 repeat 69..107 CDD:293791 28/37 (76%)
WD40 repeat 112..150 CDD:293791 30/37 (81%)
WD40 repeat 155..192 CDD:293791 30/36 (83%)
WD40 repeat 199..235 CDD:293791 22/35 (63%)
WD40 repeat 243..280 CDD:293791 21/36 (58%)
WD40 repeat 287..309 CDD:293791 15/21 (71%)
wdr82NP_001159740.1 WD40 <10..303 CDD:225201 201/292 (69%)
WD40 15..300 CDD:238121 194/284 (68%)
WD 1 19..58 22/38 (58%)
WD40 repeat 24..61 CDD:293791 20/36 (56%)
WD40 repeat 67..105 CDD:293791 28/37 (76%)
WD 2 105..144 29/38 (76%)
WD40 repeat 110..148 CDD:293791 30/37 (81%)
WD 3 146..184 29/37 (78%)
WD40 repeat 153..190 CDD:293791 30/36 (83%)
WD 4 192..231 24/38 (63%)
WD40 repeat 197..233 CDD:293791 22/35 (63%)
WD 5 237..276 24/38 (63%)
WD40 repeat 241..282 CDD:293791 23/40 (58%)
WD 6 280..313 23/32 (72%)
WD40 repeat 285..307 CDD:293791 15/21 (71%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579040
Domainoid 1 1.000 154 1.000 Domainoid score I4236
eggNOG 1 0.900 - - E1_KOG1446
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H42951
Inparanoid 1 1.050 480 1.000 Inparanoid score I1433
OMA 1 1.010 - - QHG54522
OrthoDB 1 1.010 - - D1146727at2759
OrthoFinder 1 1.000 - - FOG0002456
OrthoInspector 1 1.000 - - oto41358
orthoMCL 1 0.900 - - OOG6_102214
Panther 1 1.100 - - LDO PTHR19861
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1421
SonicParanoid 1 1.000 - - X1869
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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