DRSC/TRiP Functional Genomics Resources

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Protein Alignment Wdr82 and SPAC824.04

DIOPT Version :9

Sequence 1:NP_609217.1 Gene:Wdr82 / 34153 FlyBaseID:FBgn0032030 Length:317 Species:Drosophila melanogaster
Sequence 2:NP_593443.1 Gene:SPAC824.04 / 2542845 PomBaseID:SPAC824.04 Length:341 Species:Schizosaccharomyces pombe


Alignment Length:336 Identity:117/336 - (34%)
Similarity:186/336 - (55%) Gaps:39/336 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VVRSFKVAKIFRENT--DKINAIDFAPNGEHL-ISCSEDDQIVIYDCEKGTQSRTVNSKKYGVDL 70
            ::.|.|.|:.||:|:  ..||:||::.:||:: .:||.||.:.|||.....|..|:...:.|:::
pombe     5 ILSSLKPAQSFRDNSLGSFINSIDYSDSGEYVATTCSADDTVQIYDALDPKQVHTITCFETGIEV 69

  Fly    71 IHFTHANNTAIHSSTKVDDTIRYLSLHDNKYLRYFPGHTKKVISLCISPVEDTFLSGSLDKTLRL 135
            ..|||.::..:.|:||.:..|:|:|::|||.:.||.|||..|.|:.:||:||.|:|.:.||||:|
pombe    70 ARFTHHDHNLLLSTTKGNKDIQYVSIYDNKRISYFSGHTDIVSSIEVSPIEDQFVSTANDKTLKL 134

  Fly   136 WDL-RSPNCQGLMHLSGRPIAAYDPEGLIFAAGVNSES-IKLYDLRSFDKGPFVTFKLNQEKEC- 197
            |.: :|..|.|.:.|....|.||||.||:||...:|.| |.|||:|::...||.||.::..:.. 
pombe   135 WKMNQSSRCLGNLDLPSLGIPAYDPTGLVFAVACHSLSRIFLYDVRNYGSDPFSTFTIDDSRYLS 199

  Fly   198 ---------DWTGLKFSRDGKTILISTNGSVIRLVDAFHG---TPLQTFTGYP-NNKGIPIEASF 249
                     :|..::||.|||.||:||..:|..::|||.|   :.|:.|...| :|.......:|
pombe   200 RFSFPPMMPEWKHMEFSNDGKCILLSTRANVHYILDAFSGDVLSRLEDFQELPFSNNFHGGSTTF 264

  Fly   250 SPDSQFIFSGSTDGRVHIWNA-----DTGN---------KVSVLNGDHPGPVQCVQFNPKYMMLA 300
            .|...|:...:.|..:::||.     ..|.         ..|::|   ||   .|::||:|..|.
pombe   265 VPQGNFVIGSADDRTLNVWNLRHTFHHKGKTRPPEHRIVSQSIIN---PG---LVKYNPRYDQLL 323

  Fly   301 SACTNMAFWLP 311
            :|.:.:.||||
pombe   324 TAGSQLVFWLP 334

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Wdr82NP_609217.1 WD40 17..302 CDD:238121 109/317 (34%)
WD40 repeat 26..63 CDD:293791 15/37 (41%)
WD40 repeat 69..107 CDD:293791 14/37 (38%)
WD40 repeat 112..150 CDD:293791 17/38 (45%)
WD40 repeat 155..192 CDD:293791 19/37 (51%)
WD40 repeat 199..235 CDD:293791 16/38 (42%)
WD40 repeat 243..280 CDD:293791 8/50 (16%)
WD40 repeat 287..309 CDD:293791 6/21 (29%)
SPAC824.04NP_593443.1 WD40 5..>328 CDD:225201 113/328 (34%)
WD40 22..286 CDD:295369 96/263 (37%)
WD40 repeat 25..62 CDD:293791 14/36 (39%)
WD40 repeat 67..105 CDD:293791 13/37 (35%)
WD40 repeat 112..148 CDD:293791 16/35 (46%)
WD40 repeat 155..191 CDD:293791 18/35 (51%)
WD40 repeat 198..252 CDD:293791 17/53 (32%)
WD40 repeat 259..283 CDD:293791 4/23 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1446
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG54522
OrthoFinder 1 1.000 - - FOG0002456
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102214
Panther 1 1.100 - - O PTHR19861
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1421
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
87.810

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