DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17292 and Lipc

DIOPT Version :9

Sequence 1:NP_001285749.1 Gene:CG17292 / 34152 FlyBaseID:FBgn0032029 Length:340 Species:Drosophila melanogaster
Sequence 2:XP_006243421.1 Gene:Lipc / 24538 RGDID:3009 Length:510 Species:Rattus norvegicus


Alignment Length:259 Identity:76/259 - (29%)
Similarity:120/259 - (46%) Gaps:49/259 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 VLYLHGYL--------EDPDVES-IHVIAEAYL----------ERKDTNLIVLDWGELADGNYMF 107
            |:.:||:.        :|.|.:| :..:.|.::          :.:..|:.::||..||..:|..
  Rat    85 VMIIHGWSGSESATVGKDSDNDSQVDGLLETWIWKIVGALKSRQSQPVNVGLVDWISLAYQHYAI 149

  Fly   108 DAFPNLKQLGPELAKVLLKMFDH-GLDIEKFHIVGHSMGGQLAGLLGREITKRTKGVRKIKRISA 171
             |..|.:.:|.|:|.:||.:.:. .....|.|::|:|:|..::|..|..:    .|.|||.||:.
  Rat   150 -AVRNTRVVGQEVAALLLWLEESMKFSRSKVHLIGYSLGAHVSGFAGSSM----GGKRKIGRITG 209

  Fly   172 LDPAFPLF---YPGTHLSANDAEFVDVIHTDAWLY-----GAPTSTGTADFWPNGGYSLQPGCP- 227
            ||||.|:|   .|...||.:||.|||.|||....:     |........||:|||| |.||||. 
  Rat   210 LDPAGPMFEGTSPNERLSPDDANFVDAIHTFTREHMGLSVGIKQPIAHYDFYPNGG-SFQPGCHF 273

  Fly   228 KRNYKMLSDNDLS--------SHRRSWWFWAESV--SDRYPIGFDAVPAKKWSDFKQNKIVENC 281
            ...||.::::.|:        :|.||...:.:|:  |:....||.   ......|.|. :..||
  Rat   274 LELYKHIAEHGLNAITQTIKCAHERSVHLFIDSLQHSNLQNTGFQ---CSNMDSFSQG-LCLNC 333

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17292NP_001285749.1 Pancreat_lipase_like 23..303 CDD:238363 76/259 (29%)
LipcXP_006243421.1 Lipase 18..366 CDD:278576 76/259 (29%)
Pancreat_lipase_like 47..362 CDD:238363 76/259 (29%)
PLAT_LPL 369..504 CDD:238856
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11610
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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