DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS13 and rps13

DIOPT Version :10

Sequence 1:NP_476938.1 Gene:RpS13 / 34149 FlyBaseID:FBgn0010265 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_001002079.1 Gene:rps13 / 415169 ZFINID:ZDB-GENE-040625-52 Length:151 Species:Danio rerio


Alignment Length:151 Identity:131/151 - (86%)
Similarity:142/151 - (94%) Gaps:0/151 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MGRMHAPGKGISQSALPYRRTVPSWLKLNADDVKEQIKKLGKKGLTPSKIGIILRDSHGVAQVRF 65
            ||||||||||:|||||||||:||:||||.:|||||||.||.|||||||:||:|||||||||||||
Zfish     1 MGRMHAPGKGLSQSALPYRRSVPTWLKLTSDDVKEQIFKLAKKGLTPSQIGVILRDSHGVAQVRF 65

  Fly    66 VNGNKILRIMKSVGLKPDIPEDLYHMIKKAVAIRKHLERNRKDKDGKFRLILVESRIHRLARYYK 130
            |.|||||||:||.||.||:||||||:||||||:||||||||||||.|||||||||||||||||||
Zfish    66 VTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILVESRIHRLARYYK 130

  Fly   131 TKSVLPPNWKYESSTASALVA 151
            |:.||.|||||||||||||||
Zfish   131 TRRVLAPNWKYESSTASALVA 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS13NP_476938.1 PTZ00072 4..151 CDD:185427 126/146 (86%)
rps13NP_001002079.1 PTZ00072 4..151 CDD:185427 126/146 (86%)

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