DRSC/TRiP Functional Genomics Resources

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Protein Alignment RpS13 and bonsai

DIOPT Version :9

Sequence 1:NP_001033885.1 Gene:RpS13 / 34149 FlyBaseID:FBgn0010265 Length:151 Species:Drosophila melanogaster
Sequence 2:NP_611691.1 Gene:bonsai / 37587 FlyBaseID:FBgn0026261 Length:280 Species:Drosophila melanogaster


Alignment Length:114 Identity:20/114 - (17%)
Similarity:39/114 - (34%) Gaps:24/114 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 DDVKEQIKKLGKKGLTPSKIGIILRDSHGVAQVRFVNGNKILRIMKSVGLKPDIPEDLYHMIKKA 95
            |...|.:|.|.|           |.::......:|.....:..:.:..   .|.......:.|..
  Fly    68 DKADESVKSLFK-----------LSNNASYLTTKFYRDEMVKEVQRHA---QDFGSMEAKLAKMT 118

  Fly    96 VAIRK---HLERNRKDKDGKFRLILVESRIHRLARYYKTKSVLPPNWKY 141
            ..||:   |::::.:||..|.||..:..:..:..:|.:       .|.|
  Fly   119 AVIRRYQEHMDKHPRDKMIKVRLKELIDKRKKFLKYLR-------RWDY 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RpS13NP_001033885.1 PTZ00072 4..151 CDD:185427 20/114 (18%)
Ribosomal_S13_N 4..60 CDD:285331 6/28 (21%)
Ribosomal_S15p_S13e 70..145 CDD:238213 13/75 (17%)
bonsaiNP_611691.1 Ribosomal_S15 97..172 CDD:278728 13/74 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0184
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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