DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7627 and ABCC6

DIOPT Version :9

Sequence 1:NP_001245943.1 Gene:CG7627 / 34148 FlyBaseID:FBgn0032026 Length:1355 Species:Drosophila melanogaster
Sequence 2:NP_187916.3 Gene:ABCC6 / 820497 AraportID:AT3G13090 Length:1466 Species:Arabidopsis thaliana


Alignment Length:1383 Identity:439/1383 - (31%)
Similarity:689/1383 - (49%) Gaps:207/1383 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LKTADLPEN-----PREHCNFISAACFWYTMPTFIKGRKRTLDTKDLYRALKEHKSETL----GN 59
            |.:|:..:|     |......:|...|.:..|....|.::.:|.||:.:..:...:|:|    .:
plant   194 LSSAESSDNEEVTAPFSKAGILSRMSFSWMSPLITLGNEKIIDIKDVPQLDRSDTTESLFWIFRS 258

  Fly    60 KLCASWELELEKTKGKPNLLRAL-LRVFGWYFALLGLVLFLLELGLRTLQPIFLLKLIAYYTHGS 123
            ||  .|: :.|:......|::|| |.|  |...:|..:|..:......:.| :|:.....|.:|:
plant   259 KL--EWD-DGERRITTFKLIKALFLSV--WRDIVLSALLAFVYTVSCYVAP-YLMDNFVQYLNGN 317

  Fly   124 ESIESAYY------YAAGVILCSALNVIIMHPYMLGTMHVGLKMRVGMCSMIYRKALRLSKSALG 182
            ...::..|      :.|.::.|..     ...:.......||.||..:.||||.|.|.|...:..
plant   318 RQYKNQGYVLVTTFFVAKLVECQT-----QRQWFFRGQKAGLGMRSVLVSMIYEKGLTLPCHSKQ 377

  Fly   183 DTTAGHVVNLMSNDVGRLDLATIFVHYLWVGPLETLFITYLMYREIGIAAVFG----VAFMLLFI 243
            ..|:|.::|||:.|..|:...:.|:|..|:..|:.....:::|:.:|:.::..    :..||...
plant   378 GHTSGEIINLMAVDADRISAFSWFMHDPWILVLQVSLALWILYKSLGLGSIAAFPATILVMLANY 442

  Fly   244 PLQAYLGK-RTSVLRLRTALRTDERVRMMNEIISGIQVIKMYAWELPFEHMVAFARKKEINAIRH 307
            |......| ::|:::.:     |.|::..:|::..::::|:..||:.|        ..:|..:||
plant   443 PFAKLEEKFQSSLMKSK-----DNRMKKTSEVLLNMKILKLQGWEMKF--------LSKILELRH 494

  Fly   308 VSYIRGILLSFIIFLTRVSIFL----SLVGYVLLGTFLTPEV--------AFLITAYYNILRTTM 360
            :.  .|.|..|:...:.::..|    |.:.....|..|..::        |.|.|  :.||:..:
plant   495 IE--AGWLKKFVYNSSAINSVLWAAPSFISATAFGACLLLKIPLESGKILAALAT--FRILQGPI 555

  Fly   361 TVFFPQGISQMAETLVSIKRVQKYMQSDETNVMDMSVDLTEDFQGSNQETVHADGDEERDEAEDK 425
             ...|:.||.:.:|.||:.|:..::..|         ||.:|..|                   :
plant   556 -YKLPETISMIVQTKVSLNRIASFLCLD---------DLQQDVVG-------------------R 591

  Fly   426 LLGPPIATVNENAKLSEAGISISGLMAKWDVNSPDYSLNGVNLRVQPGTMLGIVGRTGSGKSSLI 490
            |   |..:       ||..:.||.....||.:||..:|..:|.:|..|..:.|.|..|||||||:
plant   592 L---PSGS-------SEMAVEISNGTFSWDDSSPIPTLRDMNFKVSQGMNVAICGTVGSGKSSLL 646

  Fly   491 QAILGELPAESGEIKVNGSMSYASQEPWLFSGTVRQNILFGQPMDRRRYAKVVKKCALERDFELL 555
            .:||||:|..||.:||.|..:|.:|.||:.||.|.:|||||:||:|..|.:|::.|:|.:|.|:|
plant   647 SSILGEVPKISGNLKVCGRKAYIAQSPWIQSGKVEENILFGKPMEREWYDRVLEACSLNKDLEIL 711

  Fly   556 PFKDKTIVGERGASLSGGQKARISLARAVYRETSIYLLDDPLSAVDTHVARHLFEQCMRGYLRER 620
            ||.|:|::||||.:||||||.||.:|||:|::..|||.|||.||||.|...|||::.:.|.||.:
plant   712 PFHDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKEVLLGLLRHK 776

  Fly   621 IVILATHQLQFLQHADQIVIMDKGRVSAVGTYESLRESGLDFASMLA----------DPERDEQS 675
            .||..|||::||..||.|::|..|:::..|.|..:.:||.||..::.          ..|....|
plant   777 TVIYVTHQVEFLPEADLILVMKDGKITQAGKYHEILDSGTDFMELVGAHTEALATIDSCETGYAS 841

  Fly   676 EERSRSRSGSYTHSHSDQRRNSEQSLLSMADSCMDDLEAEQANNQERQEAGQIGLRLYSKYFKAG 740
            |:.:..:.....| |.:::.|..           |:..:.|...:|.:|.|::|..:|.||....
plant   842 EKSTTDKENEVLH-HKEKQENGS-----------DNKPSGQLVQEEEREKGKVGFTVYKKYMALA 894

  Fly   741 GGFFAFFVMMGFCVLSQGLASLGDYFLSYWVTKKGNVAYRADNNDTTRSEELEPRLSTWLRDIGL 805
            .|.....:::...||.| |.|:|..:...|||..              |:::||.:|.       
plant   895 YGGAVIPLILVVQVLFQ-LLSIGSNYWMTWVTPV--------------SKDVEPPVSG------- 937

  Fly   806 SVDAEMLDTYIFTVITVLTILVTVARSFLFFNLAM-------KASIRLHNSMFRGITRAAMYFFN 863
                       ||:|.|. :|:.||.||.....|:       |.:..|...|...|.||:|.||:
plant   938 -----------FTLILVY-VLLAVASSFCILIRALLVAMTGFKMATELFTQMHLRIFRASMSFFD 990

  Fly   864 TNPSGRILNRFSKDMGQVDEILPA----VMMDVIQIFLALAGIVIVIAVVNPLFLIPTVVLGIIF 924
            ..|.||||||.|.|....|..||.    |.:..|.| |.:.|:::.:|....:..|| ||....:
plant   991 ATPMGRILNRASTDQSVADLRLPGQFAYVAIAAINI-LGIIGVIVQVAWQVLIVFIP-VVAACAW 1053

  Fly   925 YQLRTFYLKTSRDVKRMEAITRSPVYSHLAASLTGLSTIRAFGAQRVLEAEFDNYQDMHSSAFYM 989
            |  |.:|:..:|::.|:..|:||||..|.:.:|:|::|||:|..:.....:.....|.:|.  ..
plant  1054 Y--RQYYISAARELARLAGISRSPVVHHFSETLSGITTIRSFDQEPRFRGDIMRLSDCYSR--LK 1114

  Fly   990 FISTSRAFGYWLDCFCVIYIAIITLSFFIFPPA------------NGGDVGLAITQAMGMTGM-- 1040
            |.||...  .|| ||     .:..||.|.|..:            |....|||||.|:.:..:  
plant  1115 FHSTGAM--EWL-CF-----RLELLSTFAFASSLVILVSAPEGVINPSLAGLAITYALNLNTLQA 1171

  Fly  1041 -VQWGMRQSAELENTMTAVERVVEYEDI--EPEGALEAPADKKPPKSWPEQGKIVFDELSLRYTP 1102
             :.|.:   .:|||.|.:|||:::|.:|  ||...:|.   .:|.||||.:|:|....|.:||  
plant  1172 TLIWTL---CDLENKMISVERMLQYTNIPSEPPLVIET---TRPEKSWPSRGEITICNLQVRY-- 1228

  Fly  1103 DPKSENVLKSLSFVIKPKEKVGIVGRTGAGKSSLINALFRL-SYNDGSVLIDKRDTSEMGLHDLR 1166
            .|....||..|:.......|.|||||||.|||:||..|||: ....|.:.||..:...:||||||
plant  1229 GPHLPMVLHGLTCTFPGGLKTGIVGRTGCGKSTLIQTLFRIVEPAAGEIRIDGINILSIGLHDLR 1293

  Fly  1167 SKISIIPQEPVLFSGTMRYNLDPFDEYSDDKLWRSLEEVKLKEVVADLPSGLQSKITEGGTNFSV 1231
            |::|||||:|.:|.||:|.||||.:||:||::|.:|:..:|.:.|......|.|.::|.|.|:||
plant  1294 SRLSIIPQDPTMFEGTIRSNLDPLEEYTDDQIWEALDNCQLGDEVRKKELKLDSPVSENGQNWSV 1358

  Fly  1232 GQRQLVCLARAILRENRILVMDEATANVDPQTDGLIQTTIRNKFKECTVLTIAHRLHTIMDSDKV 1296
            ||||||||.|.:|:.:::||:|||||::|..||.|||.|:|:.|.:|||:|||||:.:::|||.|
plant  1359 GQRQLVCLGRVLLKRSKLLVLDEATASIDTATDNLIQETLRHHFADCTVITIAHRISSVIDSDMV 1423

  Fly  1297 LVMDAGRAVEFGTPYELL 1314
            |::|.|...|..:|..||
plant  1424 LLLDQGLIKEHDSPARLL 1441

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7627NP_001245943.1 CFTR_protein 12..1315 CDD:273530 437/1375 (32%)
ABC_membrane 107..360 CDD:294371 58/275 (21%)
ABCC_MRP_domain1 445..645 CDD:213217 99/199 (50%)
ABC_membrane 815..1014 CDD:294371 67/209 (32%)
ABCC_MRP_domain2 1089..1310 CDD:213211 106/221 (48%)
ABCC6NP_187916.3 PLN03232 67..1452 CDD:215640 439/1383 (32%)
ABC_membrane 286..555 CDD:294371 60/291 (21%)
ABCC_MRP_domain1 601..801 CDD:213217 99/199 (50%)
ABC_membrane 902..1173 CDD:294371 91/318 (29%)
ABCC_MRP_domain2 1217..1437 CDD:213211 106/221 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 99 1.000 Domainoid score I2369
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H74563
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.720

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