DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7627 and Abcc10

DIOPT Version :9

Sequence 1:NP_001245943.1 Gene:CG7627 / 34148 FlyBaseID:FBgn0032026 Length:1355 Species:Drosophila melanogaster
Sequence 2:NP_001101671.1 Gene:Abcc10 / 316231 RGDID:1306696 Length:1494 Species:Rattus norvegicus


Alignment Length:1437 Identity:463/1437 - (32%)
Similarity:709/1437 - (49%) Gaps:231/1437 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 PENPRE---HCNFISAA-----------------CFWYTMPTFIKGRKRTL----DTKDLYRALK 50
            |..|||   |..|:|..                 .:.:..|...:|.:..|    ||..|.|.| 
  Rat   192 PGGPREPWTHDPFLSPESQEREVAEDGESWLSRFSYAWLAPLLARGVRGELRQPQDTCRLPRRL- 255

  Fly    51 EHKSETLGNKLCASWELELEKTKGKPNLLRALLRVFGWYFALLGLVLFLLELGLRTLQPIFLLKL 115
             |.: .|.....|.|       |....|.|||...||..:..||| |.::...|....|:.|..|
  Rat   256 -HPA-YLARAFQAHW-------KEGAQLWRALYGAFGCCYIALGL-LKMVGTMLGFSGPLLLSLL 310

  Fly   116 IAYYTHGSESIESAYYYAAGVILCSALNVIIMHPYMLGTMHVGLKMRVGMCSMIYRKALRLSKSA 180
            :.:...|.|.:.....|..|:...|.::.::.:.|......|.|:.||.:.|::|||.|:|..|.
  Rat   311 VGFLEEGQEPLSHGLLYVLGLASGSVISAVLQNQYGYEVRKVTLQARVAVLSILYRKTLKLGPSR 375

  Fly   181 LGDTTAGHVVNLMSNDVGR-LDLATIFVHYLWVGPLETLFITYLMYREIGIAAVFGVAFMLLFIP 244
               ...|.|:||:..|..| |:.|..| |..|..||:.....||:|.::|:|.:.|:...||.:|
  Rat   376 ---PPTGEVLNLLGTDSERLLNFAGSF-HEAWGLPLQLAITLYLLYEQVGVAFLAGLVLALLLVP 436

  Fly   245 LQAYLGKRTSVLRLRTALRTDERVRMMNEIISGIQVIKMYAWELPFEHMVAFARKKEINAIRHVS 309
            :...:..|............|.||::|.|::|||:|:|.:.||......|...|.:|:..:|.:.
  Rat   437 VNKVIATRIMANNQEMLRHKDARVKLMTELLSGIRVLKFFRWEQALGDRVKACRTQELGRLRVIK 501

  Fly   310 YIRG----------ILLSFIIFLTRVSIFLSLVGYVLLGTFLTPEVAFLITAYYNILRTTMTVFF 364
            |:..          :::..:||:|          |||||..||....|...|..::|...:. .|
  Rat   502 YLDAACVYLWAALPVVICIVIFIT----------YVLLGHQLTATKVFTALALVHMLILPLN-NF 555

  Fly   365 PQGISQMAETLVSIKRVQKYMQSDETNVMDMSVDLTEDFQGSNQETVHADGDEERDEAEDKLLGP 429
            |..|:.:.|:.||:.|:|:::                |....:.|..::.             .|
  Rat   556 PWVINGLLESKVSLDRIQRFL----------------DLPSYSPEAYYSP-------------DP 591

  Fly   430 PI--ATVNENAKLSEAGISISGLMAKWDVNSPDYSLNGVNLRVQPGTMLGIVGRTGSGKSSLIQA 492
            |.  :||.|   |.||       :..||...........:|:|:.|.::||||:.|.|||||:.|
  Rat   592 PTEPSTVLE---LHEA-------LFSWDPTGTSQKTFISHLQVKKGMLVGIVGKVGCGKSSLLAA 646

  Fly   493 ILGELPAESGEIKVNG---SMSYASQEPWLFSGTVRQNILFGQPMDRRRYAKVVKKCALERDFEL 554
            |.|||....|.:.|:.   ....|:||||:...|:|.|:|||:..|.:.|.:|::.|||..|..:
  Rat   647 ITGELHRLCGWVAVSDLSKGFGLATQEPWIQCATIRDNVLFGKTFDAQLYREVLEACALNDDLSI 711

  Fly   555 LPFKDKTIVGERGASLSGGQKARISLARAVYRETSIYLLDDPLSAVDTHVARHLFEQCMRGYLRE 619
            ||..|:|.|||:|.:|||||:|||:||||||:|.::|||||||:|||..||.||..:|:.|.|..
  Rat   712 LPAGDQTEVGEKGVTLSGGQRARIALARAVYQEKTLYLLDDPLAAVDADVANHLLHRCILGVLGH 776

  Fly   620 RIVILATHQLQFLQHADQIVIMDKGRVSAVGTYESLRESGLDFASMLADPERDEQSEERSRSRSG 684
            ...:|.||:.::|:.||.:::|:.||:...|....:........:.|||.|:        .:.||
  Rat   777 TTRLLCTHRTEYLERADLVLLMEAGRLVRAGPPSEILPLVQAAPTALADKEQ--------VTDSG 833

  Fly   685 SYTHSHSDQRRNSEQSLLSMADSCMDDLEAEQANNQERQEAGQIGLRLYSKYFKAGGGFFAFFVM 749
            .....|:.::...|   |.:|.:....|..|::.::     |.:.|.:|..|::|.|...|..::
  Rat   834 QSPSVHNLEKTTEE---LDVAQNTSGRLVQEESKSE-----GAVALHVYRAYWRAMGSGLATAIL 890

  Fly   750 MGFCVLSQGLASLGDYFLSYWVTKKGNVAYRADNNDTTRSEELEPRLSTWLRDIGL--------- 805
            :.. :|.|...:..|::|::|:::     .:|..|    |.|..|..|: .|.:|.         
  Rat   891 ISL-LLMQATRNGADWWLAHWLSQ-----LKAGRN----SSEERPASSS-PRSMGFFSPRLLLFS 944

  Fly   806 ---------------SVDAEMLDTYIFTVITVLTILVTVARSFLFFNLAMKASIRLHNSMFRGIT 855
                           |.|.....| ::..|..:..|.|:.|:.||...|::|:..||:.:...:.
  Rat   945 PGNLYIPLHKATSNGSSDVHFYLT-VYATIAGVNSLCTLLRAVLFAAGALQAAASLHHRLLHRLL 1008

  Fly   856 RAAMYFFNTNPSGRILNRFSKDMGQVDEILPAVMMDVIQIFLALAGIVIVIAVVNPLFLIPTVVL 920
            .|.:.|:::.||||:|||||.|:..||:.||.::..::...:.|.|::.|:....|..|:....|
  Rat  1009 MAPVTFYDSTPSGRVLNRFSSDVACVDDSLPFLLNILLANSVGLLGLLAVLGSGLPWLLLLLPPL 1073

  Fly   921 GIIFYQLRTFYLKTSRDVKRMEAITRSPVYSHLAASLTGLSTIRAFGA--------QRVLE---- 973
            ..|:|.::..|..:.|:::|:.::|.||:|||||.:|.||..:||.||        ||:||    
  Rat  1074 SFIYYGVQRRYRASFRELRRLGSLTLSPLYSHLADTLAGLPVLRAAGATYRFEEENQRLLELNQR 1138

  Fly   974 AEFDNYQDMHSSAFYMFISTSRAFGYWLD-------CFCVIYIAIITLSFFIFPPANGGDVGLAI 1031
            .:|.:|..|.                |||       ...|..||.|.|.......||.|.|||.:
  Rat  1139 CQFASYATMQ----------------WLDIRLQLMGAAVVSAIAGIALVQHQQGLANPGLVGLVL 1187

  Fly  1032 TQAMGMTGMVQWGMRQSAELENTMTAVERVVEYE-DI--EPEGALEAPADKKPPK------SWPE 1087
            :.|:.:||::...:....:.|..|.:|||:.||. ||  ||.|        :||:      ||..
  Rat  1188 SYALSLTGLLSGLVSSFTQTEAMMVSVERLEEYSCDIPQEPHG--------QPPQSPHQRVSWLT 1244

  Fly  1088 QGKIVFDELSLRYTPDPKSENVLKSLSFVIKPKEKVGIVGRTGAGKSSLINALFR-LSYNDGSVL 1151
            ||.:.|.::.|.|.|.  ..|.|..::|.::|.||:|||||||:|||||...||| |..:.|.||
  Rat  1245 QGSVEFQDVVLVYRPG--LPNALDGVTFRVEPGEKLGIVGRTGSGKSSLFLVLFRLLEPSAGQVL 1307

  Fly  1152 IDKRDTSEMGLHDLRSKISIIPQEPVLFSGTMRYNLDPFDEYSDDKLWRSLEEVKLKEVVADLPS 1216
            :|..|||::.|.:|||::::|||||.|||||:|.||||...:.|..||::||:..|.||...: .
  Rat  1308 LDGVDTSQLELAELRSQLAVIPQEPFLFSGTVRENLDPQGLHEDRALWQALEQCHLSEVAMAI-G 1371

  Fly  1217 GLQSKITEGGTNFSVGQRQLVCLARAILRENRILVMDEATANVDPQTDGLIQTTIRNKFKECTVL 1281
            ||..::.|.|.:.|:|||||:|||||:|.:.:||.:|||||:||.:||.|:|.||..:|...|||
  Rat  1372 GLDGELGERGRDLSLGQRQLLCLARALLTDAKILCIDEATASVDQKTDQLLQQTICRRFANKTVL 1436

  Fly  1282 TIAHRLHTIMDSDKVLVMDAGRAVEFGTPYELLTLADSKVFHGMVKQTGHATYESLLKIAQKAFE 1346
            ||||||:||::||:|||:.|||.||..:|..|             :...|:.:..||:.:|:.  
  Rat  1437 TIAHRLNTILNSDRVLVLQAGRVVELDSPSAL-------------RNQPHSLFRQLLQSSQQG-- 1486

  Fly  1347 NRQNHSL 1353
               .|||
  Rat  1487 ---AHSL 1490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7627NP_001245943.1 CFTR_protein 12..1315 CDD:273530 455/1395 (33%)
ABC_membrane 107..360 CDD:294371 73/263 (28%)
ABCC_MRP_domain1 445..645 CDD:213217 87/202 (43%)
ABC_membrane 815..1014 CDD:294371 66/217 (30%)
ABCC_MRP_domain2 1089..1310 CDD:213211 114/221 (52%)
Abcc10NP_001101671.1 CFTR_protein 211..1485 CDD:273530 452/1406 (32%)
ABC_membrane 290..552 CDD:294371 77/276 (28%)
ABCC_MRP_domain1 599..802 CDD:213217 91/212 (43%)
ABC_membrane 957..1190 CDD:294371 76/249 (31%)
PBP2_NikA_DppA_OppA_like <1201..>1274 CDD:294989 25/82 (30%)
ABCC_MRP_domain2 1246..1465 CDD:213211 114/221 (52%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345113
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.650

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