DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7627 and abc3

DIOPT Version :9

Sequence 1:NP_001245943.1 Gene:CG7627 / 34148 FlyBaseID:FBgn0032026 Length:1355 Species:Drosophila melanogaster
Sequence 2:NP_595055.1 Gene:abc3 / 2540937 PomBaseID:SPBC359.05 Length:1465 Species:Schizosaccharomyces pombe


Alignment Length:1393 Identity:454/1393 - (32%)
Similarity:717/1393 - (51%) Gaps:175/1393 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 PRE--HCNFISAACF-WYTMPTFIK-GRKRTLDTKDLYRALKEHKSETLGNKLCA--SWELELEK 71
            |.|  :.|..|...| |  :.:||| |....|...|::....:.:|   ||.:..  .|.:...|
pombe   171 PSEVRYANIFSKLSFSW--ISSFIKFGYTNYLKESDVWLLPPDERS---GNLIIGFEDWWIYHSK 230

  Fly    72 TKGKPNLLRALLRVFGWYFALLGLVLFLLELGLRTLQPIFLLKLI----AYYTHGSESIESAYYY 132
            .|.:...|..||....|....|..:..|::..|..:||..:.|.|    :|.:...||....:..
pombe   231 NKRRSLFLWKLLFFNHWKLVALITITKLIQDVLAFVQPTLIQKTILFISSYTSPNPESPSRGFII 295

  Fly   133 AAGVILCSALNVIIMHPYMLGTMHVGLKMRVGMCSMIYRKALRLSKSALGDTTAGHVVNLMSNDV 197
            |..|::.:.|..:::..|....|.:|::.:..:.:.||||:|.||.||..:.:.|.::|.|:.|.
pombe   296 AILVLVANFLQTLLLQQYNQLIMLLGMRWKTELLASIYRKSLLLSSSARQNRSIGDIINYMAVDT 360

  Fly   198 GRLDLATIFVHYLWVGPLETLFITYLMYREIGIAAVFGVAFMLLFIP---LQAYLGKRTSVLRLR 259
            .::....|::..:..||.:.......:|..:|.:|..|||..::..|   :.|.:.|:...:.::
pombe   361 QKISDLPIYLFIIVSGPFQIALALSNLYHLMGYSAFTGVAASVILFPCNIIVANVYKKFQSILMK 425

  Fly   260 TALRTDERVRMMNEIISGIQVIKMYAWELPF-EHMVAFARKKEINAIRHVSYIRGILLSFIIFLT 323
               ..|.|.::|.|||:.|:.||:||||.|| :.::.....||::.::.:.:|..|.....||.|
pombe   426 ---NKDSRSKLMTEIINNIRSIKLYAWETPFLQKLLHIRNTKELSMLKKIGFITAIGDFAWIFTT 487

  Fly   324 RVSIFLSLVGYVLLGTF---------LTPEVAFLITAYYNILRTTMTVFFPQGISQMAETLVSIK 379
                  .:|..|..|.|         ||.::.|...:.:|:|:..:.: .|..||.:.|..||:.
pombe   488 ------IIVTTVAFGAFIIFHGKTQALTADIVFPAVSLFNLLQFPLAM-LPTVISSLLEASVSVS 545

  Fly   380 RVQKYMQSDETNVMDMSVDLTEDFQGSNQ----ETVHADGDEERDEAEDKLLGPPIATVNENAKL 440
            |:.:::.:.|.           |:.|..:    |..|                            
pombe   546 RIYEFLIAQEL-----------DYNGVQRFPATEIPH---------------------------- 571

  Fly   441 SEAGISISGLMAKWDVN------SPDYSLNGVNLRVQPGTMLGIVGRTGSGKSSLIQAILGELPA 499
             |..:.|......|...      :|  :|..:|...:.|.:..|.|:.|:|||||::|.:|.:..
pombe   572 -EICLEIKSGTFSWSKKTLKQQVTP--TLRQINFVAKNGELTCIFGKVGAGKSSLLEACMGNMYK 633

  Fly   500 ESGEIKVNGSMSYASQEPWLFSGTVRQNILFGQPMDRRRYAKVVKKCALERDFELLPFKDKTIVG 564
            .||.:...||::||:|:||:|..|:|:|||||...|...|.|.:..|.|:||||:....|:|.||
pombe   634 NSGSVFQCGSLAYAAQQPWIFDATIRENILFGSEFDPELYEKTIHACCLKRDFEIFTEGDQTEVG 698

  Fly   565 ERGASLSGGQKARISLARAVYRETSIYLLDDPLSAVDTHVARHLFEQCM--RGYLRERIVILATH 627
            ::|||||||||:|||||||:|.:..||||||.||:||.||:|.|.:...  .|:||...|:|.|:
pombe   699 QKGASLSGGQKSRISLARAIYSQADIYLLDDVLSSVDQHVSRDLIKNLFGPEGFLRTHCVVLTTN 763

  Fly   628 QLQFLQHADQIVIMDKGRVSAVGTYESLRES-GLDFASMLAD--PERDEQ----------SEERS 679
            .|..|:.||.|.|:..|::...|.||.|..| ..:....|::  .|:|.|          |.:.|
pombe   764 SLNVLKEADSIYILSNGKIVEKGNYEHLFVSTNSELKQQLSEFNDEKDTQPLPEHTTSYPSTQIS 828

  Fly   680 RSRS----GSYTHSHSDQRRNSEQSLLSMADSCM------DDLEAEQANNQERQEAGQIGLRLYS 734
            .:.|    |..|:| |.:|::|.....|...:.:      ||.....|...|..:.|::...:|.
pombe   829 LAPSIHVEGLETYS-SSERKDSSNKYKSRKRNPIRQKVTEDDKGKCVAQTDELVQRGKVKWHVYW 892

  Fly   735 KYFKAGG-G---FFAFFVMMGFCVLSQGLASLGDYFLSYWVTKKGNVAYRADNNDTTRSEELEPR 795
            .|||:.. |   .:.||::.|   :...:|:  :.:|.:|..:.|.           .|.||.| 
pombe   893 MYFKSCSIGLILLYFFFIISG---IMMNVAT--NVWLKHWSEENGK-----------SSSELNP- 940

  Fly   796 LSTWLRDIGLSVDAEMLDTYIF------TVITVLTILVTVARSFLFFNLAMKASIRLHNSMFRGI 854
             |.:.          .|..|:|      ..|:..::.:||.       ..:::...||:||.:.|
pombe   941 -SPYF----------YLGIYLFFGFLSCAFISSSSLTMTVL-------CGIRSGRYLHDSMLKTI 987

  Fly   855 TRAAMYFFNTNPSGRILNRFSKDMGQVDEILPAVMMDVIQIFLALAGIVIVIAVVNPLFLIPTVV 919
            .||.|.||.|..|||||||||.|:.:|||::....|...:..:.:..|:.||....||.|:..|.
pombe   988 LRAPMGFFETTSSGRILNRFSNDVYKVDEVVSLTFMFFFRNSIQVLFILGVICYSAPLSLLLIVP 1052

  Fly   920 LGIIFYQLRTFYLKTSRDVKRMEAITRSPVYSHLAASLTGLSTIRAFGAQRVLEAEFDNYQDMHS 984
            |..::...|.:|::|||::||::.:||||:|:|:..||:|||||||:|.|.....|.|...|.:.
pombe  1053 LFFLYLYNRAYYVRTSRELKRLDNVTRSPLYAHVQESLSGLSTIRAYGMQETFVEENDLRIDTNH 1117

  Fly   985 SAFYMFISTSRAFGYWLDC------FCVIYIAIITLSFFIFPPANGGDVGLAITQAMGMTGMVQW 1043
            ..::||.|:||.....::|      ||..:..|::.   |....|.|.||.:::.|:.:|..:.:
pombe  1118 RVWFMFFSSSRWQAIRVECIGDLIIFCTAFYGILSA---IKGSPNPGLVGFSLSYAIQITQGLSF 1179

  Fly  1044 GMRQSAELENTMTAVERVVEYEDIEPEGALEAPADKKPPKSWPEQGKIVFDELSLRYTPDPKSEN 1108
            .::||.:.||...:|||::||.:::.| |.|...:.:||..||..|.:.|:..|.:|..|  ...
pombe  1180 IVQQSVDAENNTVSVERILEYINVKSE-APEIIPENRPPCEWPTDGAVSFNHYSAKYRED--LSF 1241

  Fly  1109 VLKSLSFVIKPKEKVGIVGRTGAGKSSLINALFR-LSYNDGSVLIDKRDTSEMGLHDLRSKISII 1172
            .|.:::..|.|:||:|||||||||||:|..|||| :...:|.:.||..|.::.||:||||::|||
pombe  1242 ALNNINIEISPREKIGIVGRTGAGKSTLAMALFRIIEPTEGKIEIDNEDITKFGLYDLRSRLSII 1306

  Fly  1173 PQEPVLFSGTMRYNLDPFDEYSDDKLWRSLEEVKLKEVVADLPSGLQSKITEGGTNFSVGQRQLV 1237
            |||..:|.|.:|.||||....:|.|:|..||...||..::.|..||.|::.|||.|||.|||||:
pombe  1307 PQESQIFEGNIRENLDPNHRLTDKKIWEVLEIASLKNCISQLEDGLYSRVAEGGANFSSGQRQLI 1371

  Fly  1238 CLARAILRENRILVMDEATANVDPQTDGLIQTTIRNKFKECTVLTIAHRLHTIMDSDKVLVMDAG 1302
            ||||.:|...|||::|||||:|..:||.::|.|||.:||:.|:||:|||::|:||||::||:|.|
pombe  1372 CLARVLLTSTRILLLDEATASVHAETDAIVQQTIRKRFKDRTILTVAHRINTVMDSDRILVLDHG 1436

  Fly  1303 RAVEFGTPYELLTLADSKVFHGMVKQTG 1330
            :.|||....:||...|| :|:.:.|::|
pombe  1437 KVVEFDATKKLLENKDS-MFYSLAKESG 1463

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7627NP_001245943.1 CFTR_protein 12..1315 CDD:273530 448/1376 (33%)
ABC_membrane 107..360 CDD:294371 69/269 (26%)
ABCC_MRP_domain1 445..645 CDD:213217 89/207 (43%)
ABC_membrane 815..1014 CDD:294371 74/210 (35%)
ABCC_MRP_domain2 1089..1310 CDD:213211 111/221 (50%)
abc3NP_595055.1 MRP_assoc_pro 101..1464 CDD:188098 454/1393 (33%)
ABC_membrane 254..527 CDD:294371 71/281 (25%)
ABCC_MRP_domain1 575..781 CDD:213217 89/207 (43%)
ABC_membrane 907..1177 CDD:279056 94/307 (31%)
ABCC_MRP_domain2 1224..1443 CDD:213211 111/220 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 170 1.000 Domainoid score I894
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG51855
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

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