DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7627 and haf-8

DIOPT Version :9

Sequence 1:NP_001245943.1 Gene:CG7627 / 34148 FlyBaseID:FBgn0032026 Length:1355 Species:Drosophila melanogaster
Sequence 2:NP_502776.1 Gene:haf-8 / 190369 WormBaseID:WBGene00001818 Length:633 Species:Caenorhabditis elegans


Alignment Length:526 Identity:135/526 - (25%)
Similarity:242/526 - (46%) Gaps:56/526 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   833 FLFFNLAMKASIR-LHNSMFRGITRAAMYFFNTNPSGRILNRFSKDMGQVDEILPAVMMDVI-QI 895
            :.|...|.|.:.| :...:||.|....:.||:.|.:|::::|.:.|...:...||..:..:: .:
 Worm   116 YFFMQYAEKLTARNIRIQLFRSILHQEISFFDENKTGQLVSRITHDSESISNTLPVHIETLVNNL 180

  Fly   896 FLALAGIVIVIAVVNPLFLIPTVVLGIIFYQLRTFYL---KTSRDVKRMEAITRSPVYSHLAASL 957
            |:....|.|:......|.|...:...|.....|.:.|   |.|.......|.:...|...|:|  
 Worm   181 FMFFGSIPIMFCYSWQLTLTSFIEFPITLLMTRYYGLAVEKLSEKENDATAASNETVEEVLSA-- 243

  Fly   958 TGLSTIRAFGAQRVLEAEF-DNYQDMHSSAFYMFISTSRA-----FGY-WLDCFCVIYIAIITLS 1015
              :.|:|:|.|:...:..: .|.:|      :..|||...     :.| |         |::..|
 Worm   244 --IRTVRSFAAENFEQKRYTKNTED------WFKISTKTVTLGTIYNYFW---------ALMLRS 291

  Fly  1016 FFIFPPANGGDVGLAITQAMGMTGMV-----QWGMRQS--------AELENTMTAVERVVEYEDI 1067
            ..:.....||  .||:...|....::     .|.:..:        :.:..|:....:|:...:.
 Worm   292 QDVIRYLYGG--YLALNGRMAPEALLTFIFYHWRLHTAINAFSSLFSGVMKTIGLSRKVIHLINR 354

  Fly  1068 EPEGALEAPADKKPPKSWPEQGKIVFDELSLRYTPDPKSENVLKSLSFVIKPKEKVGIVGRTGAG 1132
            :|:  |:.....:.|:.   ||||.|:.:...| |..|:.||:..::..|:..:.|.:||.:|.|
 Worm   355 KPQ--LDYDFGTETPEI---QGKIEFEVVEFAY-PTRKTVNVINGINLSIESGKTVALVGPSGNG 413

  Fly  1133 KSSLINALFRLSY--NDGSVLIDKRDTSEMGLHDLRSKISIIPQEPVLFSGTMRYN-LDPFDEYS 1194
            ||:|: :|.:..|  ..|.:|.|......:......|.|:::.|||.|||||:|.| |...:..:
 Worm   414 KSTLV-SLIQQFYTPQSGRILTDGIPIQNINHQHYHSNIALVAQEPTLFSGTIRENILFGIENGT 477

  Fly  1195 DDKLWRSLEEVKLKEVVADLPSGLQSKITEGGTNFSVGQRQLVCLARAILRENRILVMDEATANV 1259
            ::.:.::.|...:.|.|:.:..|..:|..|.|...|.||:|.:.:|||::|..|:|::||||:.:
 Worm   478 EEAMLKAAEMANVHEFVSKMDDGYDTKCGEKGVQMSGGQKQRIAIARALIRNPRVLILDEATSAL 542

  Fly  1260 DPQTDGLIQTTIRNKFKECTVLTIAHRLHTIMDSDKVLVMDAGRAVEFGTPYELLTLADSKVFHG 1324
            |.:::|::|..:....||.||:.|||||.|:..:.|:.|::.|...|.|...||:...|...:..
 Worm   543 DSESEGMVQEALNKCAKERTVIVIAHRLSTVRKAQKIAVIENGSVKEMGCHDELMENQDGLYYKL 607

  Fly  1325 MVKQTG 1330
            :.||.|
 Worm   608 VSKQLG 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7627NP_001245943.1 CFTR_protein 12..1315 CDD:273530 131/509 (26%)
ABC_membrane 107..360 CDD:294371
ABCC_MRP_domain1 445..645 CDD:213217
ABC_membrane 815..1014 CDD:294371 41/192 (21%)
ABCC_MRP_domain2 1089..1310 CDD:213211 75/223 (34%)
haf-8NP_502776.1 MdlB 42..613 CDD:224055 134/524 (26%)
ABC_membrane 63..318 CDD:279056 47/222 (21%)
ABC_MTABC3_MDL1_MDL2 373..611 CDD:213216 76/239 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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