DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7627 and pgp-8

DIOPT Version :9

Sequence 1:NP_001245943.1 Gene:CG7627 / 34148 FlyBaseID:FBgn0032026 Length:1355 Species:Drosophila melanogaster
Sequence 2:NP_509811.2 Gene:pgp-8 / 181277 WormBaseID:WBGene00004002 Length:1243 Species:Caenorhabditis elegans


Alignment Length:1392 Identity:308/1392 - (22%)
Similarity:546/1392 - (39%) Gaps:373/1392 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 FLLELGLRTLQPIFLLKLIAYYTHGSESIESAYYYAAGVILCSALNVIIMHPYMLG--------- 153
            ||..:|:.:.....|.:....||.|..|       .|.|.:.:|:|...:.|..|.         
 Worm    38 FLFVIGVVSAICTGLTQPFMSYTFGEVS-------QAFVRITAAVNNASLDPSDLEKAYEMFHAD 95

  Fly   154 ----TMHVGLKMRVGMCSMIYRKALRLSK-SALGDTTA-----GHVVNLMSNDVGRLDLATIFVH 208
                .:|.||   || |:.::...::.|. ..:||.|.     ..::.|:..|....|  ||...
 Worm    96 MNNVVIHFGL---VG-CAFMFFGFIQFSLFKYIGDNTTYRLRHKFILRLLKKDAKYFD--TISTG 154

  Fly   209 YLWVGPLETLFITYL-MYRE-----------------IGIAAVFGVAFMLL-FIPLQAYLGKRTS 254
            |     |.|:....| .:||                 ||.|..|..::.|. :..:.|:....:.
 Worm   155 Y-----LSTVLNDNLERFREAFNEKIAFIICFSTDFAIGTALAFYTSWTLASYGSVFAFGIVISG 214

  Fly   255 VLRLRTALRTDERVRM---------------MNEIIS---GIQVIKMYAWELPFEHMVAFARKKE 301
            :|...:.::::|:..|               ...:||   ..|.::.|:.||.........|...
 Worm   215 LLNSTSMMKSNEKQSMHYSNAGAIAFQALCSFKTVISLNGQTQELEKYSAELKEGEKFGSRRAFF 279

  Fly   302 INAIRHVSY-----IRGILL---SFIIF---LTRVSIFLSLVGYVLLGTFLTPEVAFLITAY-YN 354
            :...|.:|:     :.|.:|   :.:|:   :..|:| ::|..|:|...|...| |||..:| .|
 Worm   280 LATSRGLSHFFCNALNGTILYVGADLIYNKTMNTVAI-VTLFHYMLFSAFSLGE-AFLHISYLLN 342

  Fly   355 ILRTTMTVFFPQGISQMAETLVSIKRVQKYMQSDETNVMDMSVDLTEDFQGSNQETVHADGDEER 419
            .:.:...:|                           :|:....|:.|    :||:....|.::  
 Worm   343 AINSATPIF---------------------------DVLTSDDDMIE----NNQDNEQTDSNK-- 374

  Fly   420 DEAEDKLLGPPIATVNENAKLSEAGISISGLMAKWDV-----NSPDYS-LNGVNLRVQPGTMLGI 478
                                      :|.|:::..:|     :.||.. |.|::..|:.|..:.:
 Worm   375 --------------------------TIQGMLSFNNVKFAYPSRPDVDILRGISFDVKQGECIAL 413

  Fly   479 VGRTGSGKSSLIQAILGELPAESGEIKVNGS-------------MSYASQEPWLFSGTVRQNILF 530
            ||.:|||||:::|.:|.....:||.||:..|             :...||||.||:.|:.:||.|
 Worm   414 VGASGSGKSTIVQLLLHFYNIQSGTIKIGDSHLHDINLKQLRNAIGVVSQEPVLFNTTIEENIRF 478

  Fly   531 GQPMDRRRYAKVVKKCALERDFELLPFKD--KTIVGERGASLSGGQKARISLARAVYRETSIYLL 593
            |.|...........:.|...|| :...||  |||||||||.||||||.||::||.:.:..:|.||
 Worm   479 GNPNATSSEIYEALRKANAYDF-VCNIKDGLKTIVGERGAQLSGGQKQRIAIARVLVKNPAILLL 542

  Fly   594 DDPLSAVDTHVARHLFEQCMRGYLRERIVILATHQLQFLQHADQIVIMDKGRVSAVGTYESLRES 658
            |:..||:|: .:....:..::.....|..|:..|:|..::|.|:|::|..|:::.||::|.|...
 Worm   543 DEATSALDS-ASERAVQLALKKASEGRTTIIIAHRLSTIRHCDKIMVMSNGKIAEVGSHEELISM 606

  Fly   659 GLDFASMLADPERDEQS-EERSRSRSGSYTHSHSDQRRNSEQSLLSMADSCMDDLEAE----QAN 718
            ..::::::.....|.|| ||....:........:....|..:.|..:......|:|.:    :..
 Worm   607 DREYSNLVRAQFFDSQSVEEDINGQGAEEVIQKTPPNLNDGEPLEELLKETSSDIEIKSNIWEVL 671

  Fly   719 NQERQEAGQIGLRLYSKYFKAGGGFFAFFVMMGFCVLSQGLASLGDYFLSYWVTKKGNVAYRADN 783
            .:.|.:|..:.:.:.....:.          ..|.:|||.:..                .|:|  
 Worm   672 RECRPDAFLLSMAVIGSAIQG----------CNFPILSQIIVQ----------------TYKA-- 708

  Fly   784 NDTTRSEELEPRLSTWLRDIGLSVDAEMLDTY------IFTVITVLTILVTVARSFLFFNLAMKA 842
                                 .::|.|.:.||      :|.|:.|:..:....:.|.|..::.|.
 Worm   709 ---------------------YAMDGENILTYGHFWAAMFLVLGVIRPITLYCQFFFFGKVSEKL 752

  Fly   843 SIRLHNSMFRGITRAAMYFFNT---NPSGRILNRFSKD----MGQVDEILPAVMMDVIQIFLALA 900
            |.||....|:.:......|::.   :|: |::||.:.|    ...||..|.:::|.::...||  
 Worm   753 STRLRIKSFQHLLSLPCAFYDDPKHSPT-RLVNRLNTDPSNIKAAVDARLGSLLMSMVSFSLA-- 814

  Fly   901 GIVIVIAVVNPLFLIPTVVLGI-IFYQLRTFYLKTS-------------------------RDVK 939
               |:||......|...|||.. :.|..:..|.||:                         :.||
 Worm   815 ---ILIACYYSWKLTLQVVLFFPVLYYAKFLYKKTTTISIKEDSVAFENSNKIAIEVLDNMKTVK 876

  Fly   940 --RMEAITRSPVYSHLAASLT---------GLSTIRAFGAQRVLEA---EFDNY---------QD 981
              .|||...:.|..:||...|         ||:...:.|..:::.|   :|..|         .|
 Worm   877 ALNMEARVINLVMEYLAVLKTSYPRRSVVMGLANGFSAGCSQIVYAISFKFGTYLILQKEVIPMD 941

  Fly   982 MHSSAF---YMFISTSRAFGYWLDCFCVIYIAIITLSFFIFP---PANGGDVGLAITQAMGMTGM 1040
            |:.|..   |.......|..|..|....|:.|.:..:.|.:|   |.|......:||        
 Worm   942 MYLSLITLSYTSNMAGSAISYMPDFRKAIHSAGLIFNLFTYPATMPFNSDTGSRSIT-------- 998

  Fly  1041 VQWGMRQSAELENTMTAVERVVEYEDIEPEGALEAPADKKPPKSWPEQGKIVFDELSLRYTPDPK 1105
                                                           :|::..:.:...|...| 
 Worm   999 -----------------------------------------------KGEVNGENVKFHYHQRP- 1015

  Fly  1106 SENVLKSLSFVIKPKEKVGIVGRTGAGKSSLINALFRLSY--NDGSVLIDKRDTSEMGLHDLRSK 1168
            ...||.|::..::..:.:.|||.:|:|||::| :|..:.|  :.|.:.||..:...:.|..|||.
 Worm  1016 DYTVLDSVNLKVEAGKTLAIVGPSGSGKSTII-SLLEMFYRADQGFIKIDNDNVENINLDHLRSN 1079

  Fly  1169 ISIIPQEPVLFSGTMRYNLDPFDEYSDDKLWRSLEEVKLKEV---------VADLPSGLQSKITE 1224
            :.::.|.||||:.::|.|:    .|.   |.|::.:.:::..         |..||.||.:.:.:
 Worm  1080 LGLVSQGPVLFNCSIRDNI----LYG---LTRNISQTEIENALQIANAFNFVFQLPQGLDTIVGD 1137

  Fly  1225 GGTNFSVGQRQLVCLARAILRENRILVMDEATANVDPQTDGLIQTTIRNKFKECTVLTIAHRLHT 1289
            .|...|.||:|.:.:.|||||..::|::||||:.:|.:::.::|..:....:..:.:.:||||.|
 Worm  1138 RGAQLSGGQKQRIAITRAILRNPKLLLLDEATSALDTESEKIVQNALDTASERLSTIVVAHRLST 1202

  Fly  1290 IMDSDKVLVMDAGRAVEFGTPYELLTL 1316
            |:::|.:.|:..|:.||.||..:||.:
 Worm  1203 IINADSIAVLRNGKVVEQGTHNQLLAV 1229

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7627NP_001245943.1 CFTR_protein 12..1315 CDD:273530 307/1389 (22%)
ABC_membrane 107..360 CDD:294371 65/320 (20%)
ABCC_MRP_domain1 445..645 CDD:213217 74/220 (34%)
ABC_membrane 815..1014 CDD:294371 58/263 (22%)
ABCC_MRP_domain2 1089..1310 CDD:213211 67/231 (29%)
pgp-8NP_509811.2 PTZ00265 29..1241 CDD:240339 308/1392 (22%)
ABC_membrane 44..326 CDD:294371 58/300 (19%)
ABC_MTABC3_MDL1_MDL2 382..617 CDD:213216 77/236 (33%)
ABC_membrane 685..953 CDD:279056 62/322 (19%)
ABC_MTABC3_MDL1_MDL2 1005..1240 CDD:213216 69/234 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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