DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7627 and pgp-5

DIOPT Version :9

Sequence 1:NP_001245943.1 Gene:CG7627 / 34148 FlyBaseID:FBgn0032026 Length:1355 Species:Drosophila melanogaster
Sequence 2:NP_001257116.1 Gene:pgp-5 / 181276 WormBaseID:WBGene00003999 Length:1252 Species:Caenorhabditis elegans


Alignment Length:1362 Identity:313/1362 - (22%)
Similarity:540/1362 - (39%) Gaps:335/1362 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 LLELGLRTLQPIFLLKLIAYYTHGSESIESAYYYAAGVILCSALNVIIMHPYMLGTMHVGLKMRV 163
            |.|..:..:..:|.|...||:|.|                  .|...||       ..||.....
 Worm    88 LFESDMNRVVLLFFLVGFAYFTFG------------------FLQFSIM-------KFVGDNTAY 127

  Fly   164 GMCSMIYRKALRLSKSALGDTTAGHVVNLMSNDVGR------------LDLATIFVHYLWVGPLE 216
            .:......:.||...|.....:.||:..::::::.|            :.|.|.||       :.
 Worm   128 NVRRQYISRLLRKDISYFDGMSTGHLSIVLNDNMERFREVFNEKIALIIALLTDFV-------IG 185

  Fly   217 TLFITYLMYREIGIAAVFGVAFMLLFIPLQAYLGKRTSVLRLRTALRTDERVRMMNEIISGI--- 278
            |:...|..:|......||  :|.::...|....||          ::.:|:   .||.||..   
 Worm   186 TILAFYTDWRLACYGTVF--SFGIVLSGLLDSWGK----------MKNNEK---QNEHISNAGSI 235

  Fly   279 ------------------QVIKMYAWELPFEHMVAFARKKEINAIRHVSYIRGILLSFIIF---- 321
                              |.::.|..||......|..|....:..|...|.....|:|:|.    
 Worm   236 AFQALGCYKTVSSLNGQQQEVERYTEELKNGEKYALNRAFVFSLSRSADYFFTNALNFVILYFGA 300

  Fly   322 ------LTRVSIFLSLVGYVLLGTFLTPEVAFLITAYYNILRTTMTVFFPQGISQMAETLVSIKR 380
                  .....:.:.::.|:|.|::...|....|:...:.:..|:.:         |:.|     
 Worm   301 NMIYEGTIEPGVVVRILYYILFGSYCLGEAILHISRLASAIPLTVPI---------ADIL----- 351

  Fly   381 VQKYMQSDETNVMDMSVDLTEDFQGSNQETVHADGDEERDEAEDKLLGPPIATVNENAKLSEAGI 445
                :.||.|.....|.::.:.|||.                                      |
 Worm   352 ----LDSDATADEFFSEEIKDTFQGI--------------------------------------I 374

  Fly   446 SISGLMAKWDVNSPDYS-LNGVNLRVQPGTMLGIVGRTGSGKSSLIQAILGELPAESGEIKVNG- 508
            |...::..:... ||.. |..::..||.|..:.:||.:|||||::||.:|.....:||.|.::| 
 Worm   375 SFKNVLFSYPTR-PDVPVLKEISFNVQGGECIALVGASGSGKSTVIQLLLHYYNIDSGRISIDGN 438

  Fly   509 ------------SMSYASQEPWLFSGTVRQNILFGQPMDRRRYAKVVKKCALERDFELLPFKD-- 559
                        :|....|||.||:.::.:||.||:|....:......|.|...|| :..|.|  
 Worm   439 DIYNINIKQLRQAMGVVFQEPVLFNTSIEENIRFGKPDATEQEIIDALKNANAFDF-VCNFPDGI 502

  Fly   560 KTIVGERGASLSGGQKARISLARAVYRETSIYLLDDPLSAVDTHVARHLFEQCMRGYLRERIVIL 624
            |||||||||.||||||.||::||.:.|...|.|||:..||:|.. :..:.::.::.....|..|:
 Worm   503 KTIVGERGAQLSGGQKQRIAIARTLVRNPRILLLDEATSALDNE-SEFIVQEALQKASIGRTTIV 566

  Fly   625 ATHQLQFLQHADQIVIMDKGRVSAV----------GTYESLRESGLDFASMLADPERDEQSEERS 679
            ..|:|..:::|::|::|:||.:..|          |.|.:|.::.|    |..:.|:..::|||.
 Worm   567 VAHRLSTIRNANKIIVMEKGEIVEVGDHKQLIAMNGVYNNLVQTQL----MSTNYEKMNENEERV 627

  Fly   680 RSRSGSYTHSHSDQRRN--SEQSLLSMADSCMDDLEAEQANNQERQEAGQIGLRLYSKYFKAGGG 742
            ..:|     ||||...|  |.|. :...|..:..|.||    .:.:.|.:..:....||.::   
 Worm   628 TRQS-----SHSDFPSNEISHQK-IDQEDDYVKKLIAE----IKEEGAKKSNICEIIKYCRS--- 679

  Fly   743 FFAFFVMMGFCVLSQGLASLGD------YFLSYWVTKKGNVAYRADNNDTTRSEELEPRLSTWLR 801
                    .:|:|.  :|.||.      |.||..:..|...||..|.:                 
 Worm   680 --------EYCILF--IAVLGSAIQGIYYPLSSQLMIKSYEAYAFDKD----------------- 717

  Fly   802 DIGLSVDAEMLDTYIFTVITVLTILVTVARSFLFF------NLAMKASIRLHNSMFRGITRAAMY 860
                    |||....|..:::|.:..| ...|:||      ..|.|.||:|.:..|:.:......
 Worm   718 --------EMLSKSHFWALSILFLAFT-RPIFIFFQYYFFGKTAEKLSIKLRSMSFKHLMSLPCA 773

  Fly   861 FFN--TNPSGRILNRFSKDMGQ----VDEILPAVMMDVIQIFLALAGIVIVIAVVNPLFLIPTVV 919
            |::  .:.:.|:.||.:.|...    ||:.|.:|:|.:         :.|::||:...|....:.
 Worm   774 FYDDPCHTATRLSNRLNADSSNVTAAVDDRLGSVIMTL---------VAILLAVIMSFFYSWKMS 829

  Fly   920 LGIIFYQLRTFYLKTSRDVKRMEAITRSPV---YSHLAA--SLTGLSTIRAFGAQ-RVLEAEFDN 978
            |.::.:....:......|....:|:....:   .|:.||  :|..:.|:||...: ||:.....:
 Worm   830 LQVLMFCPLLYLAGYCNDNFVDQAVEEDSIAFEKSNRAAIEALENVRTVRALNMENRVILLVTSH 894

  Fly   979 YQDMHSSAF----------------YMFI-STSRAFGYWL---------DCFCVIYIAIITLSFF 1017
            .|.:.:|.|                |.|| :.|..||.||         |.:.|:....:|.|: 
 Worm   895 LQKIRNSYFKRAVIQGTANGFACSCYFFIYAVSFKFGTWLVLREEILPMDTYLVLMTLSMTASY- 958

  Fly  1018 IFPPANGGDVGLAIT------QAMGMTGMVQWGMRQSAELENTMTAVERVVEYEDIEPEGALEAP 1076
                     .|.|:.      :|:...|:                 :..:..|..|       .|
 Worm   959 ---------AGSAVAYLPDHRKAIHAAGL-----------------IFHLFTYPAI-------MP 990

  Fly  1077 ADKKPPKSWPEQGKIVFDELSLRYTPDPKSENVLKSLSFVIKPKEKVGIVGRTGAGKSSLINALF 1141
            .|....|...:.|:|....:|..|. ....:.:|..:|..:.....:.:||.:|:|||::|:.|.
 Worm   991 YDSSQGKRNIKNGEIELKNVSFEYA-QRSDKMILDGVSLKLPAGRTLALVGPSGSGKSTIISLLE 1054

  Fly  1142 RLSYN-DGSVLIDKRDTSEMGLHDLRSKISIIPQEPVLFSGTMRYN--LDPFDEYSDDKLWRSLE 1203
            |..:. ||.|.||:.:..::.||.||..:|::.||||||:.:::.|  .......|..::.::|:
 Worm  1055 RFYHAVDGEVKIDEENVVDVNLHHLRESVSLVSQEPVLFNCSIKENFLFGISHNASQLEIDQALK 1119

  Fly  1204 EVKLKEVVADLPSGLQSKITEGGTNFSVGQRQLVCLARAILRENRILVMDEATANVDPQTDGLIQ 1268
            .......|:..|.||.:.:.|.|...|.||:|.:.:||||||..::|::||||:.:|..::.::|
 Worm  1120 VANAFSFVSQFPQGLDTLVGERGAQLSGGQKQRIAIARAILRNPKVLLLDEATSALDSDSEKVVQ 1184

  Fly  1269 TTIRNKFKECTVLTIAHRLHTIMDSDKVLVMDAGRAVEFGTPYELLTLADSKVFHGMVKQTG 1330
            ..:....:..:.:.:||||.|::::|.:.|:..|:..|.||..||  |....::..:|::.|
 Worm  1185 NALDTASERLSTVVVAHRLSTVVNADSIAVLKNGKVAEQGTHEEL--LRKRSIYWRLVQKQG 1244

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7627NP_001245943.1 CFTR_protein 12..1315 CDD:273530 310/1345 (23%)
ABC_membrane 107..360 CDD:294371 51/295 (17%)
ABCC_MRP_domain1 445..645 CDD:213217 74/215 (34%)
ABC_membrane 815..1014 CDD:294371 51/242 (21%)
ABCC_MRP_domain2 1089..1310 CDD:213211 67/223 (30%)
pgp-5NP_001257116.1 PTZ00265 27..1241 CDD:240339 311/1357 (23%)
ABC_membrane 41..322 CDD:294371 49/280 (18%)
ABC_MTABC3_MDL1_MDL2 374..611 CDD:213216 79/239 (33%)
ABC_membrane 688..955 CDD:294371 63/301 (21%)
ABC_MTABC3_MDL1_MDL2 1005..1243 CDD:213216 71/240 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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