DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7627 and haf-3

DIOPT Version :9

Sequence 1:NP_001245943.1 Gene:CG7627 / 34148 FlyBaseID:FBgn0032026 Length:1355 Species:Drosophila melanogaster
Sequence 2:NP_506927.2 Gene:haf-3 / 180056 WormBaseID:WBGene00001813 Length:666 Species:Caenorhabditis elegans


Alignment Length:625 Identity:153/625 - (24%)
Similarity:283/625 - (45%) Gaps:85/625 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   742 GFFAFFVMMGFCVLSQGLASLGDYFLSYWVTKKGNVAYRADNNDTTRSEELEPR-----LSTWLR 801
            |.:.:.:|:|...|  |::|      |.::.....:....|..|.|:.::::|.     |:.:.:
 Worm    81 GPYKWRIMLGISFL--GISS------SIFLFTPRVLGKLIDEWDETKQDKMDPNDKALLLARFFK 137

  Fly   802 DIGLSVDAEMLDTYIFTVITVLTILVTVARSFLFFNLAMKASIRLHNSMFRGITRAAMYFFNTNP 866
            :..:::..          :.:|..:...||.:............|..|:|..:.|..|.||:.|.
 Worm   138 ENPIALAG----------VFMLGAIAIAARIYCMHTAGQLVINDLRKSVFNSVLRQDMAFFDKNK 192

  Fly   867 SGRILNRFSKDMGQVDEILPAVMMDVIQIFLALAG-----IVIVIAVVNPLFLIPTVVLG--IIF 924
            .|.|::|.|.|...|...:...:.|..:..:...|     :...:|:...:|::..|::|  .:|
 Worm   193 VGEIVSRLSTDALIVGYSVSMNLSDGARALITCFGSGGLMVYTSLAMCKVIFVVVPVIVGTFAVF 257

  Fly   925 YQLRTFYLKTSRDVKRMEAITRSPVYSHLAAS-LTGLSTIRAFGAQRVLEAEFDNYQDMHSSAFY 988
            .:|:..|     .:...||:..:   :.:|.. |:.:.|:|...|:|   .|...|.|..:..:.
 Worm   258 GKLQRKY-----TLMMQEAVAGA---NQVATERLSSVRTVRMLVAER---KELAAYSDKINEIWQ 311

  Fly   989 MFISTSRAFGYWLDCFCVIYIAIITLSFFIFPPANGGDVGL------------AITQAMGMTGMV 1041
            :......|.|:....|  .:...:.||..:|..:|....||            |:..|..::.|.
 Worm   312 ISKKEGLAKGFMFGSF--QFTGYLALSSILFYGSNLISQGLLTYGELSSFCLYAVLSAGSLSAMS 374

  Fly  1042 QWGMRQSAELENTMTAVERVVEYEDIEPEGALEAPADKKPPKSWPEQGKIVFDELSLRYTP-DPK 1105
            .:.:    ||...:.|..|:.|.::.||...||........|.     .|.|:.::..|.. ||.
 Worm   375 GFYL----ELMKGLGASSRLFELKNREPRIPLEGGVQIGNVKD-----TIRFEHVAFGYADRDPL 430

  Fly  1106 SENVLKSLSFVIKPKEKVGIVGRTGAGKSSLINALFRLSYN--DGSVLIDKRDTSEMGLHDLRSK 1168
            ..|:    ||.:...:...:||.:|:|||::.:.|.|| |:  .|.:|:|..|..::.....|..
 Worm   431 FHNI----SFDVPAGKITAVVGSSGSGKSTIASLLLRL-YDPTSGRILVDGTDLKDIDPSYWRRH 490

  Fly  1169 ISIIPQEPVLFSGTMRYN-----LDPFDEYSDDKLWRSLEEVKLKEVVADLPSGLQSKITEGGTN 1228
            |..:.|||||||.|::.|     |:| :..:|.::..:.::....|.::..|....:|:.|.|:.
 Worm   491 IGTVGQEPVLFSTTIKENIIYGSLEP-ENVTDAEIVSAADQSNADEFISRFPIKYDTKVGEHGST 554

  Fly  1229 FSVGQRQLVCLARAILRENRILVMDEATANVDPQTDGLIQTTIRNKF---KECTVLTIAHRLHTI 1290
            .|.||:|.:.:|||::.:..||:|||||:.:|..::.|::..: ||.   .:.||:.|||||.||
 Worm   555 LSGGQKQRIAIARALVNKPNILIMDEATSALDASSEYLVRIAL-NKLLANSKQTVMIIAHRLSTI 618

  Fly  1291 MDSDKVLVMDAGRAVEFGTPYELLTLADSKVFHGMV-KQT 1329
            ..:|:::|:|.|...|.|:..||:.:.|. :|..:| |||
 Worm   619 KHADQIVVVDRGSVAESGSYDELIAIPDG-IFRKLVEKQT 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7627NP_001245943.1 CFTR_protein 12..1315 CDD:273530 147/608 (24%)
ABC_membrane 107..360 CDD:294371
ABCC_MRP_domain1 445..645 CDD:213217
ABC_membrane 815..1014 CDD:294371 40/206 (19%)
ABCC_MRP_domain2 1089..1310 CDD:213211 74/231 (32%)
haf-3NP_506927.2 MdlB 70..657 CDD:224055 151/623 (24%)
ABC_membrane 96..366 CDD:279056 54/298 (18%)
P-loop_NTPase 415..656 CDD:304359 79/248 (32%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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