DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7627 and Abcc4

DIOPT Version :9

Sequence 1:NP_001245943.1 Gene:CG7627 / 34148 FlyBaseID:FBgn0032026 Length:1355 Species:Drosophila melanogaster
Sequence 2:XP_038948894.1 Gene:Abcc4 / 170924 RGDID:620266 Length:1382 Species:Rattus norvegicus


Alignment Length:1416 Identity:593/1416 - (41%)
Similarity:862/1416 - (60%) Gaps:145/1416 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 DLPENPREHCNFISAACFWYTMPTFIKGRKRTLDTKDLYRALKEHKSETLGNKLCASWELEL--- 69
            ::..||.:..|..|...||:..|.|..|.||.|:..|::..|.|.:|:.||.:|...|:.|:   
  Rat     7 EVKPNPLQDANLCSRLFFWWLNPLFKAGHKRRLEEDDMFSVLPEDRSKHLGEELQGYWDKEVLRA 71

  Fly    70 EKTKGKPNLLRALLRVFGWYFALLGLVLFLLELGLRTLQPIFLLKLIAYY----THGSESIESAY 130
            :|...||:|.:|:::.:...:.:|| :..|:|...|.:|||||.|:|.|:    :..|.::.:||
  Rat    72 KKDARKPSLTKAIVKCYWKSYLILG-IFTLIEETTRVVQPIFLGKIIDYFEKYDSDDSAALHTAY 135

  Fly   131 YYAAGVILCSALNVIIMHPYMLGTMHVGLKMRVGMCSMIYRKALRLSKSALGDTTAGHVVNLMSN 195
            .|||.:.||:.:..|:.|.|.......|:::||.||.||||||||||.||:|.||.|.:|||:||
  Rat   136 GYAAVLSLCTLILAILHHLYFYHVQCAGMRIRVAMCHMIYRKALRLSNSAMGKTTTGQIVNLLSN 200

  Fly   196 DVGRLDLATIFVHYLWVGPLETLFITYLMYREIGIAAVFGVAFMLLFIPLQAYLGKRTSVLRLRT 260
            ||.:.|..|||:|:||.|||:.:.:|.|::.||||:.:.|:|.:::.:|||:.:||..|.||.:|
  Rat   201 DVNKFDQVTIFLHFLWAGPLQAIGVTILLWVEIGISCLAGLAILVILLPLQSCIGKLFSSLRSKT 265

  Fly   261 ALRTDERVRMMNEIISGIQVIKMYAWELPFEHMVAFARKKEINAIRHVSYIRGILLSFIIFLTRV 325
            |..||.|:|.|||:|:|:::|||||||..|..::...|||||:.|...||:||:.::......:|
  Rat   266 AAFTDARIRTMNEVITGMRIIKMYAWEKSFADLITNLRKKEISKILGSSYLRGMNMASFFIANKV 330

  Fly   326 SIFLSLVGYVLLGTFLTPEVAFLITAYYNILRTTMTVFFPQGISQMAETLVSIKRVQKYMQSDET 390
            .:|::...|||||..:|....|:....|..:|.|:|:|||..|.:::|.:||::|::.::..||.
  Rat   331 ILFVTFTTYVLLGNKITASHVFVAMTLYGAVRLTVTLFFPSAIERVSEAVVSVRRIKNFLLLDEL 395

  Fly   391 NVMDMSVDLTEDFQGSNQETVHADGDEERDEAEDKLLGPPIATVNENAKLSEAGISISGLMAKWD 455
                                    .:.:..|..|                .:|.:.:....|.||
  Rat   396 ------------------------PERKAQEPSD----------------GKAIVHVQDFTAFWD 420

  Fly   456 VNSPDYSLNGVNLRVQPGTMLGIVGRTGSGKSSLIQAILGELPAESGEIKVNGSMSYASQEPWLF 520
            ......:|.|::...:||.:|.:||..|:|||||:.|:|||||..||.:.|:|.::|.||:||:|
  Rat   421 KALDTPTLQGLSFTARPGELLAVVGPVGAGKSSLLSAVLGELPPTSGLVSVHGRIAYVSQQPWVF 485

  Fly   521 SGTVRQNILFGQPMDRRRYAKVVKKCALERDFELLPFKDKTIVGERGASLSGGQKARISLARAVY 585
            |||||.|||||:..::.||.||:|.|||::|.:||...|.|::|:|||:||||||||::||||||
  Rat   486 SGTVRSNILFGRKYEKERYEKVIKACALKKDLQLLEDGDLTVIGDRGATLSGGQKARVNLARAVY 550

  Fly   586 RETSIYLLDDPLSAVDTHVARHLFEQCMRGYLRERIVILATHQLQFLQHADQIVIMDKGRVSAVG 650
            ::..||||||||||||..|.:|||:.|:...|.|:|.||.|||||:|:.|..|:|:..|.:...|
  Rat   551 QDADIYLLDDPLSAVDAEVGKHLFQLCICQTLHEKITILVTHQLQYLKAASHILILKDGEMVQKG 615

  Fly   651 TYESLRESGLDFASMLADPERDEQSEERSRS--------RSGSYTHSHSDQRRNSEQSLLSMADS 707
            ||....:||:||.|:|     .:::||...|        |:.:::.:....:::|..||......
  Rat   616 TYTEFLKSGVDFGSLL-----KKENEEAEPSPVPGTPTLRNRTFSEASIWSQQSSRPSLKDGVPD 675

  Fly   708 CMDDLEAEQANNQERQEAGQIGLRLYSKYFKAGGGFFAFFVMMGFCVLSQGLASLGDYFLSYWVT 772
            ..|....:.|..:|.:..|:||.:.|..||.||..:|....::...::.|....|.|::||:|..
  Rat   676 AQDAENTQAAQPEESRSEGRIGFKAYKNYFSAGASWFFIIFLVLLNLMGQVFYVLQDWWLSHWAN 740

  Fly   773 KKG--NVAYRADNNDTTRSEELEPRLSTWLRDIGLSVDAEMLDTYIFTVITVLTILVTVARSFLF 835
            ::|  |....|:.|.|...:     ||.:|.              |:|.:|.:|:|..:|||.|.
  Rat   741 RQGALNDTKNANGNVTGTLD-----LSWYLG--------------IYTGLTAVTVLFGIARSLLV 786

  Fly   836 FNLAMKASIRLHNSMFRGITRAAMYFFNTNP---------------------------------- 866
            |.:.:.||..|||.||..|.:|.:.||:.||                                  
  Rat   787 FYVLVNASQTLHNRMFESILKAPVLFFDRNPIELTQLEVFRVVDGALDSHRHLSHPHPWPQNGSL 851

  Fly   867 -----------------------SGRILNRFSKDMGQVDEILPAVMMDVIQIFLALAGIVIVIAV 908
                                   .||||||||||:|.:|::||...:|.||..|.:..::.|.|.
  Rat   852 QASVTSVTGSDVIRFPEVLLLALPGRILNRFSKDIGHMDDLLPLTFLDFIQTLLLVVSVIAVAAA 916

  Fly   909 VNPLFLIPTVVLGIIFYQLRTFYLKTSRDVKRMEAITRSPVYSHLAASLTGLSTIRAFGAQRVLE 973
            |.|..|||.|.|.|||..||.::|:|||||||:|:.|||||:|||::||.||.||||:.|:...:
  Rat   917 VIPWILIPLVPLSIIFVVLRRYFLETSRDVKRLESTTRSPVFSHLSSSLQGLWTIRAYKAEERCQ 981

  Fly   974 AEFDNYQDMHSSAFYMFISTSRAFGYWLDCFCVIYIAIITL-SFFIFPPANGGDVGLAITQAMGM 1037
            ..||.:||:||.|:::|::|||.|...||..|.:::.::.. |..:....:.|.||||::.::.:
  Rat   982 ELFDAHQDLHSEAWFLFLTTSRWFAVRLDAICAVFVIVVAFGSLVLAKTLDAGQVGLALSYSLTL 1046

  Fly  1038 TGMVQWGMRQSAELENTMTAVERVVEYEDIEPEGALEAPADKKPPKSWPEQGKIVFDELSLRYTP 1102
            .||.||.:|||||:||.|.:||||:||.|:|.|...|  ..|:||..||.:|.||||.::..|:.
  Rat  1047 MGMFQWSVRQSAEVENMMISVERVIEYTDLEKEAPWE--CRKRPPPGWPHEGVIVFDNVNFTYSL 1109

  Fly  1103 DPKSENVLKSLSFVIKPKEKVGIVGRTGAGKSSLINALFRLSYNDGSVLIDKRDTSEMGLHDLRS 1167
            |  ...|||.|:.:||.:|||||||||||||||||:||||||..:|.:.|||..|:|:||||||.
  Rat  1110 D--GPLVLKHLTALIKSREKVGIVGRTGAGKSSLISALFRLSEPEGKIWIDKILTTEIGLHDLRK 1172

  Fly  1168 KISIIPQEPVLFSGTMRYNLDPFDEYSDDKLWRSLEEVKLKEVVADLPSGLQSKITEGGTNFSVG 1232
            |:||||||||||:||||.|||||:|:||::||::||||:|||.:.|||..:.:::.|.|:|||||
  Rat  1173 KMSIIPQEPVLFTGTMRKNLDPFNEHSDEELWKALEEVQLKEAIEDLPGKMDTELAESGSNFSVG 1237

  Fly  1233 QRQLVCLARAILRENRILVMDEATANVDPQTDGLIQTTIRNKFKECTVLTIAHRLHTIMDSDKVL 1297
            ||||||||||||::||||::|||||||||:||.|||..||.||.:||||||||||:||:||||::
  Rat  1238 QRQLVCLARAILKKNRILIIDEATANVDPRTDELIQQKIREKFAQCTVLTIAHRLNTIIDSDKIM 1302

  Fly  1298 VMDAGRAVEFGTPYELLTLADSKVFHGMVKQTGHATYESLLKIAQKAFENR 1348
            |:|:||..|:..||.||...:| :|:.||:|.|.....:|.:.|::.:..|
  Rat  1303 VLDSGRLREYDEPYVLLQNPES-LFYKMVQQLGKGEAAALTETAKQVYFRR 1352

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7627NP_001245943.1 CFTR_protein 12..1315 CDD:273530 583/1377 (42%)
ABC_membrane 107..360 CDD:294371 113/256 (44%)
ABCC_MRP_domain1 445..645 CDD:213217 104/199 (52%)
ABC_membrane 815..1014 CDD:294371 96/255 (38%)
ABCC_MRP_domain2 1089..1310 CDD:213211 145/220 (66%)
Abcc4XP_038948894.1 MRP_assoc_pro 6..1334 CDD:188098 589/1396 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166345051
Domainoid 1 1.000 229 1.000 Domainoid score I2384
eggNOG 1 0.900 - - E2759_KOG0054
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H74563
Inparanoid 1 1.050 1102 1.000 Inparanoid score I217
OMA 1 1.010 - - QHG51855
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 1 1.000 - - FOG0001028
OrthoInspector 1 1.000 - - otm44390
orthoMCL 1 0.900 - - OOG6_100026
Panther 1 1.100 - - LDO PTHR24223
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X771
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1413.810

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