DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7627 and abcc4

DIOPT Version :9

Sequence 1:NP_001245943.1 Gene:CG7627 / 34148 FlyBaseID:FBgn0032026 Length:1355 Species:Drosophila melanogaster
Sequence 2:XP_002939329.2 Gene:abcc4 / 100491006 XenbaseID:XB-GENE-957302 Length:1324 Species:Xenopus tropicalis


Alignment Length:1364 Identity:605/1364 - (44%)
Similarity:873/1364 - (64%) Gaps:91/1364 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 NPREHCNFISAACFWYTMPTFIKGRKRTLDTKDLYRALKEHKSETLGNKLCASWELELEKTKG-- 74
            ||.:|.||.|...||:..|.||.|.||.|:..|:|..|.|..|..||.:|...||.||:|.:.  
 Frog    11 NPSQHANFCSKIFFWWLNPLFILGHKRKLEEDDMYEVLPEDASRKLGEELQWYWEKELQKAQNEG 75

  Fly    75 -KPNLLRALLRVFGWYFALLGLVLFLLELGLRTLQPIFLLKLIAYY----THGSESIESAYYYAA 134
             ||.|.:|::|.....|::|||..| .|..:|.:|||||..:|:|:    .:.|..:.:||..||
 Frog    76 RKPRLTKAIIRCHWKTFSVLGLFTF-FEESIRVVQPIFLGNVISYFERYDANDSAVLANAYINAA 139

  Fly   135 GVILCSALNVIIMHPYMLGTMHVGLKMRVGMCSMIYRKALRLSKSALGDTTAGHVVNLMSNDVGR 199
            .:..|:.:..::.|.|....:..|:|:||.||.||||||||||.:|:|.||.|.:|||:||||.:
 Frog   140 ALSACTLILAVVHHIYFYHLLRAGMKLRVAMCHMIYRKALRLSNTAMGKTTTGQIVNLLSNDVNK 204

  Fly   200 LDLATIFVHYLWVGPLETLFITYLMYREIGIAAVFGVAFMLLFIPLQAYLGKRTSVLRLRTALRT 264
            .|..|||:|:||.|||:.:.:|.|::.|||.:.:.|:|.:::.:|||..|||..:.||.:||..|
 Frog   205 FDQVTIFLHFLWAGPLQAIAVTVLLWMEIGPSCLAGMAVLIILMPLQLCLGKFFTSLRGKTAAFT 269

  Fly   265 DERVRMMNEIISGIQVIKMYAWELPFEHMVAFARKKEINAIRHVSYIRGILLSFIIFLTRVSIFL 329
            |.|:|.|||:|||:::|||||||..|..:|...||||||.:...||:|.:.|:.....:::.:|:
 Frog   270 DTRIRTMNEVISGMRIIKMYAWEQSFTELVNNIRKKEINKVLRSSYLRALNLASFFVASKIILFV 334

  Fly   330 SLVGYVLLGTFLTPEVAFLITAYYNILRTTMTVFFPQGISQMAETLVSIKRVQKYMQSDETNVMD 394
            :...|||||..::....|:..:.|:.:|.|:|:|||..:.:.:|..|||:|::.::..||  :..
 Frog   335 TFTTYVLLGNVISASRVFVAVSLYSAVRLTVTLFFPSAVERASEAKVSIRRIKNFLLLDE--IFK 397

  Fly   395 MSVDLTEDFQGSNQETVHADGDEERDEAEDKLLGPPIATVNENAKLSEAGISISGLMAKWDVNSP 459
            .:::|.|                   |.|:.||                 :.|..:...||....
 Frog   398 PALELPE-------------------ENEENLL-----------------VQIQDVTCYWDKTLE 426

  Fly   460 DYSLNGVNLRVQPGTMLGIVGRTGSGKSSLIQAILGELPAESGEIKVNGSMSYASQEPWLFSGTV 524
            ..:|..::..|:||.:|.::|..|:|||||:.|:|||||.:.|.:.:.|.::|.||:||:|||||
 Frog   427 IPTLQNISCSVRPGELLAVIGPVGAGKSSLLSAVLGELPKDKGFVDIRGRIAYVSQQPWVFSGTV 491

  Fly   525 RQNILFGQPMDRRRYAKVVKKCALERDFELLPFKDKTIVGERGASLSGGQKARISLARAVYRETS 589
            |.|||||:...:.:|.||::.|||::|...|...|.||:|:||.:||||||||::||||||::..
 Frog   492 RSNILFGKEYVQEKYDKVLRVCALKKDMLQLDDGDLTIIGDRGVTLSGGQKARVNLARAVYQDAD 556

  Fly   590 IYLLDDPLSAVDTHVARHLFEQCMRGYLRERIVILATHQLQFLQHADQIVIMDKGRVSAVGTYES 654
            ||||||||||||..|.|||||:|:...||:::.||.|||||:|..|.||:|:.:||:...||::.
 Frog   557 IYLLDDPLSAVDAEVGRHLFEKCICQALRKKLCILVTHQLQYLSAAKQILILKEGRMVGKGTFQE 621

  Fly   655 LRESGLDFASMLADPERDEQSEERSRSRSGSYTHSHSDQRRNSEQSLLSM-------ADSCMDDL 712
            |.:||:||||:|...|     ||:|:|:.|....| |..|..|:.|:.|.       .:...|:|
 Frog   622 LLQSGIDFASLLKSEE-----EEQSQSQEGQLIKS-SRNRTFSQSSVWSQDSTVQSHKEGATDNL 680

  Fly   713 EAE---QANNQERQEAGQIGLRLYSKYFKAGGGFFAFFVMMGFCVLSQGLASLGDYFLSYWVTKK 774
            .||   .|..:|.:..|.:|.::|.|||.:|..:...||::...:|||....|.|::||||..::
 Frog   681 AAEPVLTAIPEESRSEGTVGFKVYKKYFTSGSSYLMLFVVLLLNILSQVTYVLQDWWLSYWANEQ 745

  Fly   775 GNVAYRADNNDT-TRSEELEPRLSTWLRDIGLSVDAEMLDTYIFTVITVLTILVTVARSFLFFNL 838
            |.:...:..|.| :::|:|:  |:.:|.              ::..:||.||:..|.|..|.|::
 Frog   746 GKLNITSGTNSTGSKTEQLD--LTLYLG--------------VYAGLTVATIIFGVLRCLLVFHV 794

  Fly   839 AMKASIRLHNSMFRGITRAAMYFFNTNPSGRILNRFSKDMGQVDEILPAVMMDVIQIFLALAGIV 903
            .:.|:..|||.||:.:.:|.:.||:.||.||||||||||:|.:|:::|...:|.:|:.|.:.|::
 Frog   795 LVCAAQALHNQMFQSLLKAPVLFFDRNPIGRILNRFSKDIGHLDDLMPFTFLDFMQVLLQILGVI 859

  Fly   904 IVIAVVNPLFLIPTVVLGIIFYQLRTFYLKTSRDVKRMEAITRSPVYSHLAASLTGLSTIRAFGA 968
            .|...|.|..|||.:.|.|:||.||.::|.||||:||:|:.|||||:|||::||.||.|||||.|
 Frog   860 AVAVAVIPWILIPLLPLVIVFYFLRRYFLDTSRDIKRLESTTRSPVFSHLSSSLQGLWTIRAFKA 924

  Fly   969 QRVLEAEFDNYQDMHSSAFYMFISTSRAFGYWLDCFCVIY-IAIITLSFFIFPPANGGDVGLAIT 1032
            ::..:..||..||:||.|:::|::|||.....||..|.:: |||...|..:....:.|.||||::
 Frog   925 EKRFQDLFDAQQDLHSEAWFLFLTTSRWLAVRLDAICAVFVIAIAFGSIILAENLDAGQVGLALS 989

  Fly  1033 QAMGMTGMVQWGMRQSAELENTMTAVERVVEYEDIEPEGALEAPADKKPPKSWPEQGKIVFDELS 1097
            ..|.:.|..|||:|||||:||.|.:.|||:||..:|.|...|  :...||..||.:|.|.|:.::
 Frog   990 YGMTIMGSFQWGVRQSAEVENLMISAERVMEYTQLEKEAEWE--SKNPPPADWPNKGMITFENVN 1052

  Fly  1098 LRYTPDPKSENVLKSLSFVIKPKEKVGIVGRTGAGKSSLINALFRLSYNDGSVLIDKRDTSEMGL 1162
            ..|:.|  ...||:.|:.:|:|||||||||||||||||||.|||||:..:|.:.|||..||::||
 Frog  1053 FSYSLD--GPVVLRHLNALIRPKEKVGIVGRTGAGKSSLIAALFRLAEPEGKIWIDKYLTSKLGL 1115

  Fly  1163 HDLRSKISIIPQEPVLFSGTMRYNLDPFDEYSDDKLWRSLEEVKLKEVVADLPSGLQSKITEGGT 1227
            ||||.|:||||||||||:||||.|||||||::|::||..||||:|||.|.:||..::::::|.|:
 Frog  1116 HDLRKKMSIIPQEPVLFTGTMRKNLDPFDEHADEELWDVLEEVQLKEAVEELPGKIETQLSESGS 1180

  Fly  1228 NFSVGQRQLVCLARAILRENRILVMDEATANVDPQTDGLIQTTIRNKFKECTVLTIAHRLHTIMD 1292
            ||||||||||||||||||.||||::|||||||||:||.|||.|||.||.|||||||||||:||:|
 Frog  1181 NFSVGQRQLVCLARAILRRNRILIIDEATANVDPRTDELIQKTIREKFAECTVLTIAHRLNTIID 1245

  Fly  1293 SDKVLVMDAGRAVEFGTPYELLTLADSKVFHGMVKQTGHATYESLLKIAQKAF------ENRQN 1350
            |||::|:||||..|:..||.||...:| :|:.||:|.|.|...:|.:.|::.:      ||.:|
 Frog  1246 SDKIMVLDAGRVKEYDEPYLLLQNKES-LFYKMVQQVGKAEATALNEAAKQVYLKKIHQENTKN 1308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7627NP_001245943.1 CFTR_protein 12..1315 CDD:273530 592/1321 (45%)
ABC_membrane 107..360 CDD:294371 108/256 (42%)
ABCC_MRP_domain1 445..645 CDD:213217 100/199 (50%)
ABC_membrane 815..1014 CDD:294371 91/199 (46%)
ABCC_MRP_domain2 1089..1310 CDD:213211 146/220 (66%)
abcc4XP_002939329.2 PLN03130 2..1289 CDD:215595 600/1343 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 225 1.000 Domainoid score I2471
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H74563
Inparanoid 1 1.050 1027 1.000 Inparanoid score I277
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 1 1.000 - - FOG0001028
OrthoInspector 1 1.000 - - otm47437
Panther 1 1.100 - - LDO PTHR24223
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5383
SonicParanoid 1 1.000 - - X771
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.190

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