DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14275 and crok

DIOPT Version :9

Sequence 1:NP_609211.1 Gene:CG14275 / 34144 FlyBaseID:FBgn0032022 Length:148 Species:Drosophila melanogaster
Sequence 2:NP_609557.1 Gene:crok / 34646 FlyBaseID:FBgn0032421 Length:151 Species:Drosophila melanogaster


Alignment Length:155 Identity:47/155 - (30%)
Similarity:69/155 - (44%) Gaps:35/155 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 LVLAANLLTVNAIRCHQCNSHDNEDCGGLVVNTPRAQRDNQYLTDC-----------VPPSGEVA 65
            :||...|....||:|..|.|.::..||....|:..|      :|||           |.|:    
  Fly    12 IVLCCLLQLGQAIKCWDCRSDNDPKCGDPFDNSTLA------ITDCQQAPELEHLKGVRPT---- 66

  Fly    66 FCRKTVINFEQNDERRIERSCGFIPEK-IQ-NACFTADNEGYKQI---ICTC-PDEGCNGASSLL 124
            .|||  |..:.:.|.|..|||.::.|. |: :..|.....|...|   .||| ..:|||.|    
  Fly    67 MCRK--IRQKVHGEWRYFRSCAYMGEPGIEGDERFCLMRTGSYNIFMEFCTCNSKDGCNSA---- 125

  Fly   125 GVRQLGYS--LVGSVVSLALASMLR 147
            |:.:||..  |.|:::|:.:|.:||
  Fly   126 GIHRLGLMGVLTGTLLSVIVAHLLR 150



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR33562
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
22.010

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