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Protein Alignment strat and Rabif
DIOPT Version :9
Sequence 1: | NP_609209.2 |
Gene: | strat / 34142 |
FlyBaseID: | FBgn0032020 |
Length: | 122 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001007679.1 |
Gene: | Rabif / 304807 |
RGDID: | 1359331 |
Length: | 123 |
Species: | Rattus norvegicus |
Alignment Length: | 111 |
Identity: | 45/111 - (40%) |
Similarity: | 69/111 - (62%) |
Gaps: | 4/111 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 DGKNKSNVRCQFCNCLMLKAQEGTYNQEEVDVPLMTQKQDRTADSLN--SEPLKDFWLVKDMMTF 75
:|:|:..|.||.|...:|:.....:::.::.:|.|.:|.| ..|..| .:.|::.|||.||..|
Rat 14 EGRNRKAVLCQRCGSRVLQPGTALFSRRQLFLPSMRKKPD-LVDGSNPDGDVLEEHWLVNDMFIF 77
Fly 76 ENIGFSNTVDGRKFLVCADCERGPVGYHDLSTRHC-YLALKRVVHK 120
||:||:..|...|||||||||.||:|:|.|..::. |:||:||.|:
Rat 78 ENVGFTKDVGNVKFLVCADCEIGPIGWHCLDDKNSFYVALERVSHE 123
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
strat | NP_609209.2 |
Mss4 |
34..119 |
CDD:282300 |
37/87 (43%) |
Rabif | NP_001007679.1 |
RabGEF |
19..123 |
CDD:238150 |
42/104 (40%) |
Information from Original Tools:
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