DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7806 and VMR1

DIOPT Version :10

Sequence 1:NP_609207.1 Gene:CG7806 / 34140 FlyBaseID:FBgn0032018 Length:1487 Species:Drosophila melanogaster
Sequence 2:NP_011828.1 Gene:VMR1 / 856350 SGDID:S000001027 Length:1592 Species:Saccharomyces cerevisiae


Alignment Length:1620 Identity:427/1620 - (26%)
Similarity:745/1620 - (45%) Gaps:232/1620 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSSVVDWGDFAWNWTQFCPTGLKPFANETN-DLLPCFQEILLQLPVYTLFAAISAYNFGNQSRHV 64
            ::.:...|.||     .|.:||..:..... ||:..:           ||.|.......|....:
Yeast    35 LAIIASIGIFA-----LCRSGLSRYVRSAECDLVNEY-----------LFGAQEERKEDNSIERL 83

  Fly    65 VRNG----------LQLRMLSIRTFLAMVLALLPVAKVFAFHQQGVEL---FAADLLVVSAECIM 116
            :||.          .|.|:|.:|.|   .:..:.|.::.|.:..|:..   ..:|.|..|:|.::
Yeast    84 LRNSNTQANYVNVKKQGRILKLRHF---DITTIDVKQIDAKNHGGLTFSRPSTSDHLRKSSEIVL 145

  Fly   117 W---VVHSGFLLTARQYGELSHRGSLLINVVWLTVVVLD--AVWLRTSRHFSWWPWSLATLVCDL 176
            .   ::...||...:...||::|....:.:.||.::.|.  .|:.|::.     .|::.......
Yeast   146 MSLQIIGLSFLRVTKINIELTNRDVTTLLLFWLILLSLSILRVYKRSTN-----LWAICFTAHTT 205

  Fly   177 LFGVTLIPKGSAVYSSLPRSGVSAREDEGLLSQRYTYFQFDL--------------NESHLGHAQ 227
            ::..|.||..|....::          :.:.||.:..|:|.:              :.|.:.:.:
Yeast   206 IWISTWIPIRSVYIGNI----------DDVPSQIFYIFEFVITSTLQPIKLTSPIKDNSSIIYVR 260

  Fly   228 DEANLGSR---------FLFHWVQPLI---------LKGVAGKLRKIEDLFDLPDALNITRLSEK 274
            |:....||         ..:.|:...|         ||.:.|...:...:|.|.......:....
Yeast   261 DDHTSPSREHISSILSCITWSWITNFIWEAQKNTIKLKDIWGLSMEDYSIFILKGFTRRNKHINN 325

  Fly   275 LHLALSQSQSLWRALHRCFGVEFYLIGILRLIADLSGFAGPLLLGGLLRQDHADPNQ-------V 332
            |.|||.:|..           .:.|||:|.::.:......|.:|.....:...:||:       .
Yeast   326 LTLALFESFK-----------TYLLIGMLWVLVNSIVNLLPTILMKRFLEIVDNPNRSSSCMNLA 379

  Fly   333 YYYALGLFGSTLLSAVCATHFDWRMAMVSMKMRVGVVNSIYRKALEARGLKESKPD--------- 388
            :.|.:|:|...|..|:|.:...:....:.:::|..::..||.|.|..|.....|..         
Yeast   380 WLYIIGMFICRLTLAICNSQGQFVSDKICLRIRAILIGEIYAKGLRRRLFTSPKTSSDSDSISAN 444

  Fly   389 ---LLNLMSTDTDRIVNSCISFHFFWSIPFKLFTTLYLLYLQLGAAFLAGVIFAALLIPINRWLA 450
               ::||:|.|:.::.......:........:...:.||:..||.:..||:....::.|:|..||
Yeast   445 LGTIINLISIDSFKVSELANYLYVTVQAVIMIIVVVGLLFNFLGVSAFAGISIILVMFPLNFLLA 509

  Fly   451 KRIGIFSSGLMTAKDARLSATTETMQGAKQIKINAWEDIFITKIRGLRQEELRFLSKRKYLDAMC 515
            ..:|.|....:...|.|:|...|.:|..:.:|..|||...|.:|:.:||:|||.|.|:..:.::.
Yeast   510 NLLGKFQKQTLKCTDQRISKLNECLQNIRIVKYFAWERNIINEIKSIRQKELRSLLKKSLVWSVT 574

  Fly   516 VYFWATTPVLMCLLTFGV-SVLMGNPLIASTTYTSVALLYMLIGPLNAFPWVLNGLIEAWVSIKR 579
            .:.|..||.|:..:||.: :.:....|.|...:|:::|..:|..||:....:|:.:.::.||:||
Yeast   575 SFLWFVTPTLVTGVTFAICTFVQHEDLNAPLAFTTLSLFTLLKTPLDQLSNMLSFINQSKVSLKR 639

  Fly   580 VQQLMDVPNLDYSSYYNPIMRGSGGSGAGDDAPLDAPKASVLQMKCASFC---HDSDEQTSPTPF 641
            :.   |...:|.:..||.:              ..:|..:.::.|.|:..   :|||...    |
Yeast   640 IS---DFLRMDDTEKYNQL--------------TISPDKNKIEFKNATLTWNENDSDMNA----F 683

  Fly   642 RMKDINVDIKAGQLVCIEGPVGGGKSSFLSAIVANLQCTDGEVCV-------------QELTTGF 693
            ::..:|:..:.|:|..|.|..|.|||:.|..::..|....|.:.|             :.||..|
Yeast   684 KLCGLNIKFQIGKLNLILGSTGSGKSALLLGLLGELNLISGSIIVPSLEPKHDLIPDCEGLTNSF 748

  Fly   694 GYVPQSPWLQRGTIRDNIVWGAQFDEQWYKTVLHACALEEDLQIL-GGDLVGVGENGRTLSGGQR 757
            .|..||.||...|:::||::...::|..|..|:.||.|:.||:|| .|||..:||.|.||||||:
Yeast   749 AYCSQSAWLLNDTVKNNIIFDNFYNEDRYNKVIDACGLKRDLEILPAGDLTEIGEKGITLSGGQK 813

  Fly   758 ARVALARAVYQDKKVYLLDDVLSSLDAHVARHIIKHCIL-RLLKHKTRIVVTRNIQLFFH----- 816
            .|::||||||...|..||||.||::|:|.|..|.::||. .|:|::|.|:||.|:.|...     
Yeast   814 QRISLARAVYSSAKHVLLDDCLSAVDSHTAVWIYENCITGPLMKNRTCILVTHNVSLTLRNAHFA 878

  Fly   817 --------ANQ--ILQVKDGQLLPSEYMTQSIELSLDED---------ADDEQ--EPTVRRRSVE 860
                    .||  |.:::...|...:|:..|...|::|.         .:|.|  ||.....:.:
Yeast   879 IVLENGKVKNQGTITELQSKGLFKEKYVQLSSRDSINEKNANRLKAPRKNDSQKIEPVTENINFD 943

  Fly   861 LSNQYDKKSLDSLLLEELREYGHLSGNVFTCYWKAVTSPLAFTVLLSVVLMQLTRNLSDA-WLAY 924
            .:...|    ..|:.||.:..|.:|.:|:..|.|......|.|.|.::.:......:|.: |:.:
Yeast   944 ANFVND----GQLIEEEEKSNGAISPDVYKWYLKFFGGFKALTALFALYITAQILFISQSWWIRH 1004

  Fly   925 WVTETTLDPHKNDTSLDHILMRPTVG--NETESGHTTKFYLSIFTAIAVSNSLVTLARAFLFAYA 987
            ||.:|.:..:....::|.:   |..|  :.:::.|...:||:::..|.:..:::...:..:...:
Yeast  1005 WVNDTNVRINAPGFAMDTL---PLKGMTDSSKNKHNAFYYLTVYFLIGIIQAMLGGFKTMMTFLS 1066

  Fly   988 GIKAAIFMHEKLLKKVMFAKFNFFDITSVGRILNRFSSDTNTVDDSL-PF--ILNILLAQLAGLV 1049
            |::|:..:...||..|:.|:..|||:|.||||:||||.|...||..| |:  :....|.|.|.::
Yeast  1067 GMRASRKIFNNLLDLVLHAQIRFFDVTPVGRIMNRFSKDIEGVDQELIPYLEVTIFCLIQCASII 1131

  Fly  1050 GALCVSLYAMPWLGLVIIPMVPIYLSLQQRYRHASRDIKRLSSNAMSPLYTHFTETLQGLTTIRS 1114
              ..:::....:|.:.:|..| :|..:.:.|..|||::|||.|...||::.||:|||.|:.|||:
Yeast  1132 --FLITVITPRFLTVAVIVFV-LYFFVGKWYLTASRELKRLDSITKSPIFQHFSETLVGVCTIRA 1193

  Fly  1115 MRASPRFQRDFQVKLEESIKAQLTQSAAQQWLALRLQLLGTLLVGGAGLLAAITASHTTNPGLVG 1179
            .....||..:...|::::.:|....|...:|.:.|:.::|..:|..:|....:..:: .:.||.|
Yeast  1194 FGDERRFILENMNKIDQNNRAFFYLSVTVKWFSFRVDMIGAFIVLASGSFILLNIAN-IDSGLAG 1257

  Fly  1180 LCISYALSITGQLGDLLHAVAETEQELVAVERIDQYLQLEEEQNASGSAEPPF------GWPTQG 1238
            :.::||:..|.....|:...:..|..:.:|||:.:|..:|:| |..|..|...      .||..|
Yeast  1258 ISLTYAILFTDGALWLVRLYSTFEMNMNSVERLKEYSSIEQE-NYLGHDEGRILLLNEPSWPKDG 1321

  Fly  1239 VLSFREVQLSYREHLAPALRGITFQTEAFERIGIVGRTGAGKTSVLAALLR-VAPLTHGEIRLDQ 1302
            .:....:.|.|..:|.|.:|.::|:.:...:|||||||||||::::.||.| :.|:| |.|::|.
Yeast  1322 EIEIENLSLRYAPNLPPVIRNVSFKVDPQSKIGIVGRTGAGKSTIITALFRLLEPIT-GCIKIDG 1385

  Fly  1303 VNLKTLPLSVLRERIGVITQEPFLFEGTVRENLDPRHGFYDSEIWHAIK---------------- 1351
            .::..:.|..||..|.:|.|:|.||.||::.|:||...:.:.:|:.|:.                
Yeast  1386 QDISKIDLVTLRRSITIIPQDPILFAGTIKSNVDPYDEYDEKKIFKALSQVNLISSHEFEEVLNS 1450

  Fly  1352 ----NSAAATLLVQQLGGLDGKVETCGNNLSAGQRQLLCLARALLKNAKVVAIDEGTSNLDDESD 1412
                ||.....|     .|..::...|.|||.|:||||.:||:||:..|::.:||.||::|.:||
Yeast  1451 EERFNSTHNKFL-----NLHTEIAEGGLNLSQGERQLLFIARSLLREPKIILLDEATSSIDYDSD 1510

  Fly  1413 LSIQQALRNAFKSCTLLFIAHRLRGLHAMDRIIVLDDGRICEEGNPQSLASDSSTIFYGM 1472
            ..||..:|:.|...|:|.||||||.:...|||||:|.|.:.|...|..|..|...|||.|
Yeast  1511 HLIQGIIRSEFNKSTILTIAHRLRSVIDYDRIIVMDAGEVKEYDRPSELLKDERGIFYSM 1570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7806NP_609207.1 MRP_assoc_pro 6..1472 CDD:188098 426/1613 (26%)
VMR1NP_011828.1 MRP_assoc_pro 212..1575 CDD:188098 389/1419 (27%)

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