DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7806 and Abcb10

DIOPT Version :9

Sequence 1:NP_609207.1 Gene:CG7806 / 34140 FlyBaseID:FBgn0032018 Length:1487 Species:Drosophila melanogaster
Sequence 2:NP_062425.1 Gene:Abcb10 / 56199 MGIID:1860508 Length:715 Species:Mus musculus


Alignment Length:558 Identity:149/558 - (26%)
Similarity:246/558 - (44%) Gaps:71/558 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   940 LDHILMRPTVGNETESGHTTKFYLSIFTAIAVSNSLVTLARAFLFAYAGIKAAIFMHEKLLKKVM 1004
            :|.|...|:.|    .|.:.....::.|.:.:..:.....|.:|...:|......:...|...::
Mouse   161 IDVIYTNPSEG----YGDSLTRLCAVLTCVFLCGAAANGIRVYLMQSSGQSIVNRLRTSLFSSIL 221

  Fly  1005 FAKFNFFDITSVGRILNRFSSDTNTVDDSLPFILNILL---AQLAGLVGALCVSLYAMPWLGLVI 1066
            ..:..|||.|..|.::||.||||..:..|:...|:..|   ||.:..||.:   .:..|.|...:
Mouse   222 RQEVAFFDKTRTGELINRLSSDTALLGRSVTENLSDGLRAGAQASVGVGMM---FFVSPSLATFV 283

  Fly  1067 IPMVPIYLSLQQRYRHASRDIKRLSSNAMSPLYTHFTETLQGLTTIRSMRASPRFQRDF-QVKLE 1130
            :.:||....|...|....|.:.:.:.::::.. |...|  :.:..||::||   |.::. :|:..
Mouse   284 LSVVPPISVLAVIYGRYLRKLSKATQDSLAEA-TQLAE--ERIGNIRTIRA---FGKEMTEVEKY 342

  Fly  1131 ESIKAQLTQSAAQQWLA----------------LRLQLLGTLLVGGAGLLAAITASHTTNPGLVG 1179
            .....||.|.|.::.||                |.:...|.||:|.|.:.....:|.......||
Mouse   343 TGRVDQLLQLAQKEALARAGFFGAAGLSGNLIVLSVLYKGGLLMGSAHMTVGELSSFLMYAFWVG 407

  Fly  1180 LCISYALSITGQL------GDLLHAVAETEQELVAVERIDQYLQLEEEQNASGSAEPPFGWPTQG 1238
            |.|....|...:|      |..|..:.|.:..|    ..::.:.|:|:             ..||
Mouse   408 LSIGGLSSFYSELMKGLGAGGRLWELLERQPRL----PFNEGMVLDEK-------------TFQG 455

  Fly  1239 VLSFREVQLSYREHLAPA------LRGITFQTEAFERIGIVGRTGAGKTSVLAALLRVAPLTHGE 1297
            .|.||.|..:|     ||      .:..:....:.....:||.:|:||::|::.|||:.....|.
Mouse   456 ALEFRNVHFTY-----PARPEVSVFQDFSLSIPSGSVTALVGPSGSGKSTVVSLLLRLYDPNSGT 515

  Fly  1298 IRLDQVNLKTLPLSVLRERIGVITQEPFLFEGTVRENL----DPRHGFYDSEIWHAIKNSAAATL 1358
            :.||..:::.|....||.:||.::|||.||..:|.||:    |........::..|.:.:.||..
Mouse   516 VSLDGHDIRQLNPVWLRSKIGTVSQEPVLFSCSVAENIAYGADNLSSVTAQQVERAAEVANAAEF 580

  Fly  1359 LVQQLGGLDGKVETCGNNLSAGQRQLLCLARALLKNAKVVAIDEGTSNLDDESDLSIQQALRNAF 1423
            :.....|.|..|...|..||.||:|.:.:|||||||.|::.:||.||.||.|::..:|:||....
Mouse   581 IRSFPQGFDTVVGEKGILLSGGQKQRIAIARALLKNPKILLLDEATSALDAENEHLVQEALDRLM 645

  Fly  1424 KSCTLLFIAHRLRGLHAMDRIIVLDDGRICEEGNPQSL 1461
            :..|:|.|||||..:...:.:.|||.|:|||.|..:.|
Mouse   646 EGRTVLIIAHRLSTIKNANFVAVLDHGKICEHGTHEEL 683

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7806NP_609207.1 MRP_assoc_pro 6..1472 CDD:188098 149/558 (27%)
ABC_membrane 328..560 CDD:294371
ABCC_MRP_domain1 621..827 CDD:213217
ABC_membrane 948..1192 CDD:279056 58/263 (22%)
ABCC_MRP_domain2 1238..1458 CDD:213211 79/229 (34%)
Abcb10NP_062425.1 3a01208 8..694 CDD:273363 149/558 (27%)
ABC_membrane 142..403 CDD:279056 56/254 (22%)
ABC_MTABC3_MDL1_MDL2 458..698 CDD:213216 78/231 (34%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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