DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7806 and rdog

DIOPT Version :9

Sequence 1:NP_609207.1 Gene:CG7806 / 34140 FlyBaseID:FBgn0032018 Length:1487 Species:Drosophila melanogaster
Sequence 2:NP_651678.1 Gene:rdog / 43450 FlyBaseID:FBgn0039644 Length:1374 Species:Drosophila melanogaster


Alignment Length:1358 Identity:417/1358 - (30%)
Similarity:665/1358 - (48%) Gaps:150/1358 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 EANLGSRFLFHWVQPLILKGVAGKLRKIEDLFDLPDALNITRLSEKLHLALSQSQSLW------- 286
            :||..|::.|.|::.|..:|:.|.|.. |:|:.....|:..|::.|.       ..||       
  Fly    17 KANFFSQWSFWWMRDLFKRGLQGPLTD-EELYQHRKTLDSERVTNKF-------AELWEDELKRS 73

  Fly   287 -----RALHRCFGVEFYLIGILRLIAD-LSGFAGPLLLGGLL-----RQDHADPNQVYYYALGLF 340
                 |.:.|.:|..|..:|:...|:: :.....||.||||:     .|.....|..|.||:|:.
  Fly    74 NPSVVRMILRAYGKIFVPMGLAFSISETICKSLMPLFLGGLVGYFATNQTDISENTAYLYAMGIV 138

  Fly   341 GSTLLSAVCATHFDWRMAMVSMKMRVGVVNSIYRKALEARGLKESKPD-----LLNLMSTDTDRI 400
            ...|:..:....|.:.:..|..|:|:.:...||||.|:..  |.|..|     .:|::|.|..|.
  Fly   139 ICMLVPVITFHPFIFYIFQVGTKLRLALSGLIYRKVLQVS--KSSSNDGLRGRAINILSNDLGRF 201

  Fly   401 VNSCISFHFFWSIPFKLFTTLYLLYLQLGAAFLAGVIFAALLIPINRWLAKRIGIFSSGLMTAK- 464
            ..:....|..|..|.:.....:|:|.::|.:.:.||.|....||:..|.||:...:..  |||: 
  Fly   202 DVALCFLHDTWKGPMESILIGFLMYREIGISAVIGVSFMLSFIPLQAWAAKKAAYYRQ--MTAER 264

  Fly   465 -DARLSATTETMQGAKQIKINAWEDIFITKIRGLRQEELRFLSKRKYLDAM--CVYFWATTPVLM 526
             |.|:....|.:||.:.||:.|||..|...|..:|.:|::.:....|:.|.  |....:...|.:
  Fly   265 TDMRVKLMNEIIQGIQVIKMYAWEKSFARVIAEVRLKEVKAIRGTAYIHAALGCTSMISPLSVFL 329

  Fly   527 CLLTFGVSVLMGNPLIASTTYTSVALLYMLIGPLNAF-PWVLNGLIEAWVSIKRVQQLM------ 584
            .|.::   |.:|:||.|...||..:...||...:..| |..:..:.||.||.||.:..:      
  Fly   330 ALCSY---VYLGDPLTAQKVYTVSSYFNMLNDSMVTFWPMSITFIAEALVSAKRCKDFLLDGDKA 391

  Fly   585 DVP-NLDYS--------------SYYNPIMRGSGGSGA-------GDDAPLDAPKASVLQMKCAS 627
            :|| ||:.:              ...|..:.||..|..       .|..|....|..||:...||
  Fly   392 EVPINLEANQQTGKNKRKISKKDKQKNVELNGSLLSNGQVHHNRLRDYDPEATKKCVVLKNVSAS 456

  Fly   628 FCHDSDEQTSPTPFRMKDINVDIKAGQLVCIEGPVGGGKSSFLSAIVANLQCTDGEVCVQELTTG 692
            :    |.........::|.:.|||...|..:.||||.||||||:.::..:....||..|.   ..
  Fly   457 W----DTSDGHANCAIEDFSTDIKDQTLAAVVGPVGAGKSSFLNVLLGEVGIDKGEAMVH---GK 514

  Fly   693 FGYVPQSPWLQRGTIRDNIVWGAQFDEQWYKTVLHACALEEDLQIL-GGDLVGVGENGRTLSGGQ 756
            ..|..|..|:..||||||||:...::|:.||.|:..|.||.|:::| .|||..|||.|.:|||||
  Fly   515 ISYASQESWVFEGTIRDNIVFVEDYNERRYKKVVKVCGLERDMELLPRGDLTVVGERGVSLSGGQ 579

  Fly   757 RARVALARAVYQDKKVYLLDDVLSSLDAHVARHIIKHCILRLLKHKTRIVVTRNIQLFFHANQIL 821
            :|||:||||||:...:|||||.||::|.||.:||...||...|.:|.||:||..:|..|....:|
  Fly   580 KARVSLARAVYRKADIYLLDDPLSAVDTHVGKHIFDRCIRDFLSNKIRILVTHQVQYLFDVEHLL 644

  Fly   822 QVKDGQLLPSEYMTQSIELS-----LDEDADDEQEPTVRRRSVELSNQYDKKSLD---SLLL--- 875
            .:..|::: ::...|.::.|     |::...||........|..||....:||::   :.||   
  Fly   645 LMGSGKIM-AQGSYQELQRSRQFQFLEQTQHDESGIDTHSVSSYLSRSDSEKSMEHQHNQLLRPD 708

  Fly   876 -------EELREYGHLSGNVFTCYWKAVTSPLAFTVLLSV-VLMQLTRNLSDAWLAYWV------ 926
                   :|.:..|.:..:|:..|.||:.|.....:::|: |..::.....|.:|:.||      
  Fly   709 EHVEDVNQEQQTVGSIKMHVYASYIKALDSTFLLGIVISLFVCARIMLTGVDYFLSRWVIWEEQI 773

  Fly   927 -----------TETTLDPHKNDT---SLDHILMRPTVGNETESG---HTTKFYLSIFTAIAVSNS 974
                       |:||:   .|||   :.....:.|.:.::.::|   ....||.:|..|..:   
  Fly   774 AVNRTTTLLNETDTTI---ANDTLPINATDPYIAPLLASDIQAGIRQELVLFYATILGATLI--- 832

  Fly   975 LVTLARAFLFAYAGIKAAIFMHEKLLKKVMFAKFNFFDITSVGRILNRFSSDTNTVDDSLPFILN 1039
             |.|.|.|.|....::.::.:|::|.:.:..|...||:..|.||||||||.|..|||..||..|.
  Fly   833 -VYLIRTFGFFKMCLRISLHLHDRLFRGITRASMYFFNTNSSGRILNRFSKDIRTVDTDLPHTLL 896

  Fly  1040 ILLAQLAGLVGALCVSLYAMPWLGLVIIPMVPIYLS-LQQRYRHASRDIKRLSSNAMSPLYTHFT 1103
            ..||.:..:.|.:.:...|..|| |:...::.:.|. ::..|.:.||.:|||.|.:.||:::...
  Fly   897 DCLAFIIDVSGVVIIVAIANYWL-LIPAAIIGVILGMIRYLYVNTSRSVKRLESISRSPVFSLTN 960

  Fly  1104 ETLQGLTTIRSMRASPRFQRDFQVKLEESIKAQLTQSAAQQWLALRLQLLGTLLVGGAGLLAAIT 1168
            :|.|||||||:::|....:::|......:..|.....:..:..||...:|..:      .:.|:|
  Fly   961 QTFQGLTTIRALQAQSALEQEFHEYQNTNTSAWFLFLSCTRAFALWSDVLCIV------YMTAVT 1019

  Fly  1169 ASHTT-----NPGLVGLCISYALSITGQLGDLLHAVAETEQELVAVERIDQYLQLEEEQ--NASG 1226
            .|...     :.|.|||.|.::.::||.....:...||.|.::.:|||:.:|.:...|.  ....
  Fly  1020 FSFLLLKDEFDSGDVGLAILHSTTMTGMCQWGMRQTAELENQMTSVERVLEYTEQPSEALLETPE 1084

  Fly  1227 SAEPPFGWPTQGVLSFREVQLSYREHLAPALRGITFQTEAFERIGIVGRTGAGKTSVLAALLRVA 1291
            ..:|...||::|.:.|...:|.|....||.|:.:.|..|..|:|||||||||||:|::.::.|:|
  Fly  1085 KFKPKSEWPSKGRIEFINFKLRYSPKEAPVLKDLNFTIEPREKIGIVGRTGAGKSSIIQSIFRLA 1149

  Fly  1292 PLTHGEIRLDQVNLKTLPLSVLRERIGVITQEPFLFEGTVRENLDPRHGFYDSEIWHAIKNSAAA 1356
             ...|.||:|.|:::.:.|..||.::.:|.|:|.||.||:|.||||.....|.|:|.|:.:....
  Fly  1150 -CNEGMIRIDDVDIEHIGLHDLRSQVSIIPQDPVLFSGTLRYNLDPMDERSDEEMWKALGDVELR 1213

  Fly  1357 TLLVQQLGGLDGKVETCGNNLSAGQRQLLCLARALLKNAKVVAIDEGTSNLDDESDLSIQQALRN 1421
            :.:...:|||:.::...|:|.|.|||||:|||||:|::.|::.:||.|:|:|.|:|..|||.:|:
  Fly  1214 SYVSTLIGGLNCRMYDGGSNFSVGQRQLVCLARAILRHNKILIMDEATANVDPETDKLIQQTIRS 1278

  Fly  1422 AFKSCTLLFIAHRLRGLHAMDRIIVLDDGRICEEGNPQSLASDSSTIFYGMLLAQDID 1479
            .|..||:|.|||||..:...||::|:|.|.:.|.|:|..|...:     |..|.|.:|
  Fly  1279 KFAHCTVLTIAHRLHTVMDSDRVLVMDAGEVRELGHPYELLQRT-----GGYLRQLVD 1331

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7806NP_609207.1 MRP_assoc_pro 6..1472 CDD:188098 413/1349 (31%)
ABC_membrane 328..560 CDD:294371 67/240 (28%)
ABCC_MRP_domain1 621..827 CDD:213217 86/206 (42%)
ABC_membrane 948..1192 CDD:279056 72/252 (29%)
ABCC_MRP_domain2 1238..1458 CDD:213211 93/219 (42%)
rdogNP_651678.1 CFTR_protein 12..1343 CDD:273530 417/1358 (31%)
ABC_membrane 94..360 CDD:294371 75/272 (28%)
ABCC_MRP_domain1 448..650 CDD:213217 87/208 (42%)
ABC_membrane 821..1046 CDD:294371 69/235 (29%)
ABCC_MRP_domain2 1096..1315 CDD:213211 93/219 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I4365
eggNOG 1 0.900 - - E2759_KOG0054
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 133 1.000 Inparanoid score I246
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D138195at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100026
Panther 1 1.100 - - P PTHR24223
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
76.870

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