Protein Alignment Scgalpha and sgca

DIOPT Version :10

• Sequence 1: NP_001260246.1
• Gene: Scgalpha / 34135
• FlyBaseID: FBgn0032013
• Length: 453
• Species: Drosophila melanogaster
• Sequence 2: XP_685270.3
• Gene: sgca / 557170
• ZFINID: ZDB-GENE-041111-121
• Length: 377
• Species: Danio rerio
• Alignment Length: 355
• Identity: 80/355 - (22%)
• Similarity: 143/355 - (40%)
• Gaps: 97/355 - (27%)

  Fly    28 GELFTYKIEPQLFNWTHQVISQQFR--------YRPSLKNYPDLPSWMRYMYSHEYHAGFLYGTP 84
            |::|.|::..::|....:.:.:.|.        ::.:.:.:||||.|:|:.....|..|||||||
Zfish    32 GQMFVYELHREIFQSEFEPLHKLFGHIYNDPMVFKCNKERFPDLPRWLRFTQRDPYENGFLYGTP 96

  Fly    85 PASSAGKDLSLDVVALNRQNYET--RRVVVTMFVAHK-FP---------------TPNVVQMKIN 131
            .....||:: :::...|:::|:|  .|:|:.:....| ||               .|.|||.:|.
Zfish    97 LPQDQGKNI-IEIFVTNKRSYDTFRERLVINVGPPVKQFPYQAEFFIELREIEKVLPAVVQEEIK 160

  Fly   132 NLNWVHLMDPGRRENLRNIFRNDLWPNSKEDLSVVFMESAVNMGGRLPL-RPQQREGVIVHVGSF 195
                            |:|  ..||...  :|..|.:.||::.|||:|| .|...|||.|.:||.
Zfish   161 ----------------RDI--QHLWGTG--NLEFVNITSALDRGGRVPLPLPGYFEGVYVKLGSD 205

  Fly   196 AQFSPRLQEL-----QEEVRPLYKL----PSCTYKRTSVQKIFENVGFKLDWCAFRMVGMESP-- 249
            ..||..:|.|     |.|.....||    .:||           |....:.||...:..:..|
Zfish   206 RPFSKCMQRLQTTAHQRECESGGKLTGDCSTCT-----------NPANCISWCRSELFDLSKPVP 259

  Fly   250 --------TEILFHSGKQNEQQMPDDLNQRQEDRWMGIAREDVPERNYIDEFAFAFAIPGMIFAI 306
                    :.:|...|:.:..:.|                   |:|::..::.....:|..:..|
Zfish   260 PAPVPKVGSGVLEWGGEFSPPESP-------------------PDRDFFPDYIVTVIVPFALALI 305

  Fly   307 LIGMLSAVLCFQHEKFYDPHSEFFFANIFH 336
            |..:|:.::|.:.|.....:::.....::|
Zfish   306 LCVLLAYIMCCRREGVVKRNAKTTDLQLYH 335

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Scgalpha	NP_001260246.1	Sarcoglycan_2	2..410	CDD:461668	80/355 (23%)
sgca	XP_685270.3	None