DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8086 and NUP153

DIOPT Version :9

Sequence 1:NP_001260237.1 Gene:CG8086 / 34131 FlyBaseID:FBgn0032010 Length:1603 Species:Drosophila melanogaster
Sequence 2:NP_001265138.1 Gene:NUP153 / 9972 HGNCID:8062 Length:1506 Species:Homo sapiens


Alignment Length:1226 Identity:240/1226 - (19%)
Similarity:375/1226 - (30%) Gaps:404/1226 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 PTVRIGKIAAETTNPGPAT--------VQL--PTLIGSK--------VPDSKKKAAPSYSFGH-- 82
            ||.........|::|.|..        ||:  |:..||.        |..::....|..|.|.  
Human   516 PTFNFSSPEITTSSPSPINSSQALTNKVQMTSPSSTGSPMFKFSSPIVKSTEANVLPPSSIGFTF 580

  Fly    83 --------KLGGKYDTSGP--GPAQYNVTGMRAKG--RDYPRAATLQSRPKELTR---------- 125
                    :|.|...|..|  ..:.::||.:.:..  :..|.......||.|:.:          
Human   581 SVPVAKTAELSGSSSTLEPIISSSAHHVTTVNSTNCKKTPPEDCEGPFRPAEILKEGSVLDILKS 645

  Fly   126 --FSNPGPGEYDVVPAAKAVIDATPKYTFGQRPVALKTFQIPGPNYYQVVPLDVVKRRAPRYSFR 188
              |::|   :.|.| ||:....:...||   || |:.:|...|..:.:.:          :....
Human   646 PGFASP---KIDSV-AAQPTATSPVVYT---RP-AISSFSSSGIGFGESL----------KAGSS 692

  Fly   189 IKVNVYLVNNPAPNSYCPEKVTQSKKNAPRYTFGRRTKIEHDQGTPAPGAYCPEKVKLNKTPEFS 253
            .:.:..|:.|...::.|  ...|:.|.:||.| .::|.||    ||            ||:.:.:
Human   693 WQCDTCLLQNKVTDNKC--IACQAAKLSPRDT-AKQTGIE----TP------------NKSGKTT 738

  Fly   254 FGIKHHEQRPDYTPAPGTYKPEQVVLEHIPAYSFGLKTKHIQVSDTPAPGAYSPEKSRLHSAPAY 318
            ..            |.||              .||.|.|                          
Human   739 LS------------ASGT--------------GFGDKFK-------------------------- 751

  Fly   319 SIAGKASQDVVDCTPAPGAYEPEKCVLSRTPAFSFGHRAELAKSSDTPAPGTYNPEKVRLDHTPA 383
                          |..|.::.:.|::...|      .|....:.:||.|||.....:.|.    
Human   752 --------------PVIGTWDCDTCLVQNKP------EAIKCVACETPKPGTCVKRALTLT---- 792

  Fly   384 FTLSGRPETRSVSETPAPGSYAPEKYRNDRTPAFTFGGKHEQRLES--------STPAPGDYCPE 440
             .:|...||.:.|.:....:          |....||.|.::.:.|        |..|..:.|..
Human   793 -VVSESAETMTASSSSCTVT----------TGTLGFGDKFKRPIGSWECSVCCVSNNAEDNKCVS 846

  Fly   441 KVRHDHNPAFSFAGRHDLHKPSDTPAPGAYDTEKVRQDHNPAFSF-------AGRHDLHK--PSE 496
            .:  ...|..|.........|...|:.|:...||.::   |..|:       ..:.|..|  ..|
Human   847 CM--SEKPGSSVPASSSSTVPVSLPSGGSLGLEKFKK---PEGSWDCELCLVQNKADSTKCLACE 906

  Fly   497 TPAPGAYSPEKVRQDHNPAFSMAGKHSQK--VTSDSPAP-------GDYCPEKVRLDHTPAYSFG 552
            :..||..|..|.....:.:.:.|...|.|  |:|.|..|       |::     :......:..|
Human   907 SAKPGTKSGFKGFDTSSSSSNSAASSSFKFGVSSSSSGPSQTLTSTGNF-----KFGDQGGFKIG 966

  Fly   553 VKSD-----PKVEN---NTPAPGDY--------HPEKVRQD-HNPAYSFAGRHDLQKPDN-TPAP 599
            |.||     |..|.   :.|. ||:        .||:|::| .|..:.|.....|..|.: ||..
Human   967 VSSDSGSINPMSEGFKFSKPI-GDFKFGVSSESKPEEVKKDSKNDNFKFGLSSGLSNPVSLTPFQ 1030

  Fly   600 --GAYFPEKVRLDHNPAFSMAG-KYDAKVTNDTPAPGD----------YSPEKVRQDTNPAYSFA 651
              .:...::.:.:..|..|.|| .:...|.|.||||.:          ::...:...:.....|.
Human  1031 FGVSNLGQEEKKEELPKSSSAGFSFGTGVINSTPAPANTIVTSENKSSFNLGTIETKSASVAPFT 1095

  Fly   652 GRHDLHKPSETPA-PGAYS---PEKVRLDHNPAFTMAGKHDQK---------ILNGTPAPGDYSP 703
            .:....|..|.|| .|.:|   .|...|.....|.: |:.::|         ::.|..|  |...
Human  1096 CKTSEAKKEEMPATKGGFSFGNVEPASLPSASVFVL-GRTEEKQQEPVTSTSLVFGKKA--DNEE 1157

  Fly   704 EKCRLDHTPAYSFGGKNDPKVENNTPAPGDYHPEKVRLDHNPAYSFAGRHDLQKPSDTPAPGAYS 768
            .||:    |.:|||.....|.||::.:               .:||:.....:|.|:.||...::
Human  1158 PKCQ----PVFSFGNSEQTKDENSSKS---------------TFSFSMTKPSEKESEQPAKATFA 1203

  Fly   769 PEKVRQDHNPAFSMAGKPVEKLTNGTPAPGDYSPEKVRLNHTPAYTFGGKNDPKVENNTPAPGDY 833
              ...|....|...|.|||....|.:.:.          :.|||              |.|.|..
Human  1204 --FGAQTSTTADQGAAKPVFSFLNNSSSS----------SSTPA--------------TSAGGGI 1242

  Fly   834 HPEKVRQDHNPAFSFA-GRHDLHKPNDTPAPGAYCPEKVRQDHNPAFSMAGKYTQKVANDTPAPG 897
            ........:.|..:|. |:..  .|..:.|.|........|  :..||...|.....:..|..  
Human  1243 FGSSTSSSNPPVATFVFGQSS--NPVSSSAFGNTAESSTSQ--SLLFSQDSKLATTSSTGTAV-- 1301

  Fly   898 DYSPEKVRLDHTPAYTFGGKNDPKVESNTPAPGDYHPEKVRQDHNPAFSFAGRHNLQKPSDTPAP 962
                       || :.||    |...||......:.........:...||........||.:||.
Human  1302 -----------TP-FVFG----PGASSNNTTTSGFGFGATTTSSSAGSSFVFGTGPSAPSASPAF 1350

  Fly   963 GAYSPEKVRQDHNPAFTMA-GKHDP------KVSNDT--------PAPGDYSPEKVRLDYTPSF- 1011
            ||        :..|.|..: |...|      .:|:.|        |||             |:| 
Human  1351 GA--------NQTPTFGQSQGASQPNPPGFGSISSSTALFPTGSQPAP-------------PTFG 1394

  Fly  1012 TFAGKNNPKVENDTPAPGDYHPEKVRQDHNPAFSF--------------AGRHDLHKPSDTPAPG 1062
            |.:..:.|.|....|:...: ......:.:.||.|              :|.......|.|||..
Human  1395 TVSSSSQPPVFGQQPSQSAF-GSGTTPNSSSAFQFGSSTTNFNFTNNSPSGVFTFGANSSTPAAS 1458

  Fly  1063 AYSPEKVRQDHNPAFSMAGKYIEKITNGTPAPGDYCPEKVRLDHTPAFTFG--GKN 1116
            |          .|:.|....:     |.:||               |||.|  |||
Human  1459 A----------QPSGSGGFPF-----NQSPA---------------AFTVGSNGKN 1484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8086NP_001260237.1 None
NUP153NP_001265138.1 Nup153 113..660 CDD:285770 30/147 (20%)
zf-RanBP 692..718 CDD:279035 5/27 (19%)
RanBP2-type Zn finger 693..712 CDD:275375 3/20 (15%)
zf-RanBP 754..782 CDD:279035 6/33 (18%)
RanBP2-type Zn finger 757..776 CDD:275375 3/24 (13%)
zf-RanBP 824..853 CDD:279035 4/30 (13%)
RanBP2-type Zn finger 828..847 CDD:275375 3/18 (17%)
zf-RanBP 882..911 CDD:279035 5/28 (18%)
RanBP2-type Zn finger 886..905 CDD:275375 2/18 (11%)
Nup_retrotrp_bd 1417..1506 CDD:287557 21/98 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.