Sequence 1: | NP_001260237.1 | Gene: | CG8086 / 34131 | FlyBaseID: | FBgn0032010 | Length: | 1603 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_956979.2 | Gene: | nup98 / 777756 | ZFINID: | ZDB-GENE-040426-1180 | Length: | 1814 | Species: | Danio rerio |
Alignment Length: | 973 | Identity: | 194/973 - (19%) |
---|---|---|---|
Similarity: | 301/973 - (30%) | Gaps: | 311/973 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 50 TNPGPATVQLPTLIGSKVP--DSKKKAAPSYSFGHKL---------------------------- 84
Fly 85 --GGKYDTSGPGP------------AQYNVTGMRAK-------------GRDYPRAATLQ-SRPK 121
Fly 122 ELTRFSNPGPGEYDVVPAAKAV----IDATPKYTFGQRPVALKTFQIPGPNYYQVVPLDVVKRRA 182
Fly 183 PRYSFRIKVNVYLVNNPAPNSYCPEKVTQSKKNAPRYTFGRRTKIEHDQGTPAPGAYCPEK-VK- 245
Fly 246 -----LNKTPEFSFGIKHHEQRPDYTPAPGTY------------KPEQVVLE-------HIPAYS 286
Fly 287 FGLKTK---HIQVS----DTPAP----GAYSPEKSRLHSAPAYSIAGKASQ----DVVDCTPAPG 336
Fly 337 AYEPEKCVLSRTPAFSFGHRAELAKSSDTPA-------------------PGTYNPEKVRLDHTP 382
Fly 383 AF---TLSGRPETRSVSETPAPGSYAPEK--------YRNDRT-------PAFTFGGKHEQRLES 429
Fly 430 STPAPG----DYCPE------KVRH---------DHNPAFSFAGRHDLHKPSDTPAPGAYDTEKV 475
Fly 476 RQDHNP-AFSFAGRHDLHKPSETPAPGAYSPEKVRQDHNPAFSMA----GKHS----QKVTSDSP 531
Fly 532 APGDYCPEKVRLDHTPAYSFGVKSDPKV-----------ENNTPAPGDYHPEKVRQD---HNPAY 582
Fly 583 SFAGRHDLQKPDNTPAPGAYFPEKVRLDHNPAFSMAGKYDAKVTNDTPAPGDYSPEKVRQDTNPA 647
Fly 648 YSFAGRHDLHKPSETPAPGAYSPEKVRLDHNPAFTMAGKHDQKILN-------GTPAPGDYSPE- 704
Fly 705 -KCRLDHTPAYSFG-------GKNDPKVENNTPAPGDY----HPEKVRLDHNPAYSFAGRHDLQK 757
Fly 758 PSDTPAPGAYSPEKVRQDHNPAFSMAGKPVEKLTNGTPAPGDYS------PEKVRLNHTPAYT 814 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG8086 | NP_001260237.1 | None | |||
nup98 | NP_956979.2 | Nucleoporin_FG | 39..133 | CDD:290362 | |
Nucleoporin_FG | 217..357 | CDD:290362 | |||
Nucleoporin_FG | 324..>400 | CDD:290362 | 12/40 (30%) | ||
Nucleoporin2 | 741..881 | CDD:282016 | 25/142 (18%) | ||
Nup96 | 1333..1626 | CDD:288926 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R852 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.030 |