DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8086 and cimap1a

DIOPT Version :10

Sequence 1:NP_001260237.1 Gene:CG8086 / 34131 FlyBaseID:FBgn0032010 Length:1603 Species:Drosophila melanogaster
Sequence 2:NP_001015830.1 Gene:cimap1a / 548547 XenbaseID:XB-GENE-5889414 Length:256 Species:Xenopus tropicalis


Alignment Length:255 Identity:87/255 - (34%)
Similarity:118/255 - (46%) Gaps:18/255 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 MGGNVEQRPWTPTVRIGKIAAETTNPGPATVQLPTLIGSKVPDSKKKAAPSYSFGHKLGGKYDTS 91
            ||.:|....|.|....|.|||..::||| ...||...|....|..:..||:||.|::.....|..
 Frog     1 MGTDVWVGSWRPHRPRGPIAALYSSPGP-KYSLPGNTGFVSHDPSRYRAPAYSMGNRRFKFVDDC 64

  Fly    92 GPGPAQYNVTGMRAKGRDYPRAATLQSRPKELTRFSNPGPGEYDVVPAAKAVIDATPKYTFGQRP 156
            .|||.....:.:..||:|...|.::..|||:::.|..||||.|....|.|:...:.|.|:.|:|.
 Frog    65 SPGPGYLVPSNITVKGKDGTPAYSIYGRPKDISSFRTPGPGSYSPERAGKSAYRSAPTYSLGERT 129

  Fly   157 VALKTFQIPGPNYY---QVVPLDVVKR-RAPRYSF--RIKVNVY---LVNNPAPNSYCPEKVTQS 212
            ......|.|||..|   .|:...:|.| .||.||.  |.|:..:   |...|.|.:|........
 Frog   130 KTFSNDQTPGPAAYVLPSVIGPRIVNRISAPNYSMTGRSKIGSFHEDLQRTPGPGTYRVIDPGSY 194

  Fly   213 KKNAPRYTFGRRTKIEHDQG-TPAPGAYCPEKVKLNK--TPEFSFGIKHHEQRPDYTPAP 269
            |...|:|:...|..:..|.. .|.||||.||||.:::  .|.|||||:|    .||. ||
 Frog   195 KHRPPQYSMTARNVLPGDTTIKPGPGAYSPEKVVMSRPQAPNFSFGIRH----SDYV-AP 249

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8086NP_001260237.1 None
cimap1aNP_001015830.1 STPGR 1 66..92 7/25 (28%)
STPGR 2 181..206 6/24 (25%)
STPGR 3 217..242 14/24 (58%)

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