DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8086 and Cimap1a

DIOPT Version :10

Sequence 1:NP_001260237.1 Gene:CG8086 / 34131 FlyBaseID:FBgn0032010 Length:1603 Species:Drosophila melanogaster
Sequence 2:NP_001102394.1 Gene:Cimap1a / 365387 RGDID:1310028 Length:256 Species:Rattus norvegicus


Alignment Length:251 Identity:83/251 - (33%)
Similarity:116/251 - (46%) Gaps:29/251 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 WTPTVRIGKIAAETTNPGPATVQLPTLIGSKVPDSKKKAAPSYSFGHKLGGKYDTSGPGPAQYNV 100
            |.|....|.|.|..|:|||..: :|...|.......|..||:|||........:...||| :|:|
  Rat    10 WRPHRPRGPIMALYTSPGPKYL-IPPTTGFVKHTPTKLRAPAYSFRGAPMLLAENCSPGP-RYSV 72

  Fly   101 T-GMRAKGRDYPRAATLQSRPKELTRFSNPGPGEYDVVPAAKAVIDATPKYTFGQRPVALKTFQI 164
            . .:...|:|...|.::..|....|..: ||||:|....:.|.|.|:.|.::...|   .|||::
  Rat    73 NPKILRTGKDLGPAYSILGRYHTKTLLT-PGPGDYFPEKSTKHVFDSAPSHSISAR---TKTFRV 133

  Fly   165 ---PGPNYYQVV----PLDVVKRRAPRYSF--RIKV-----NVYLVNNPAPNSYCPEKVTQSKKN 215
               |||..|.:.    |..|.|...|.:|.  |.|:     :::....|.|.:|...:|..:|..
  Rat   134 DSTPGPAAYMLPVVMGPHTVGKVSQPSFSIKGRSKLGSFSDDLHKARTPGPAAYRQTEVQVTKFK 198

  Fly   216 APRYTFGRRTKIEHDQG-TPAPGAYCPEKVKLNK--TPEFSFGIKHHEQRPDY-TP 267
            ||:||...|.:...|:. .|.|||:.||||.|||  .|..:|||||    .|| ||
  Rat   199 APQYTMAARVEPPGDKTMKPGPGAHSPEKVTLNKPCAPTVTFGIKH----SDYMTP 250

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