DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8086 and cimap1b

DIOPT Version :10

Sequence 1:NP_001260237.1 Gene:CG8086 / 34131 FlyBaseID:FBgn0032010 Length:1603 Species:Drosophila melanogaster
Sequence 2:NP_956252.1 Gene:cimap1b / 335524 ZFINID:ZDB-GENE-030131-7464 Length:257 Species:Danio rerio


Alignment Length:240 Identity:80/240 - (33%)
Similarity:104/240 - (43%) Gaps:19/240 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 WTPTVRIGKIAAETTNPGPATVQLPTLIGSKVPDSKKKAAPSYSFG---HKLGGKYDTSGPGPAQ 97
            |.|....|.|||...:||| |..||...|....|.:.:..|::|||   |...|.|   .|||..
Zfish    11 WRPHKPRGPIAAMYNSPGP-TYALPGATGMNNHDPRMQKGPAFSFGIRHHNFHGNY---SPGPGY 71

  Fly    98 YNVTGMRAKGRDYPRAATLQSRPKELTRFSNPGPGEYDVVPAAKAVIDATPKYTFGQRPVALKTF 162
            ...:.:...|||...|.::..|.|::..|..||||.|....|.||...:.|.:|...|....:..
Zfish    72 LVPSNITRVGRDGTPAYSVYGRRKDIQPFQTPGPGSYSPENATKATYLSPPAFTLSARTKLFRND 136

  Fly   163 QIPGPNYYQVVPL----DVVKRRAPRYSF--RIKVNVY---LVNNPAPNSYCPEKVTQSKKNAPR 218
            |.|||..|.:.|:    .|.|..||..||  |..:..:   |...|.|.:|........|...|:
Zfish   137 QTPGPAAYMLPPVLGPKVVNKTSAPNVSFSGRSAIGSFHEDLRKTPGPGTYQVVDPCVYKHKGPQ 201

  Fly   219 YTFGRRTKIEHDQ-GTPAPGAYCPEKVKLN--KTPEFSFGIKHHE 260
            |:...|..:..|. ..|.|||:.||.|...  |.|.|||||:|.|
Zfish   202 YSMTGRNMMPGDMTKKPGPGAHYPEMVCFTRAKAPSFSFGIRHSE 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8086NP_001260237.1 None
cimap1bNP_956252.1 STPGR 1 103..129 10/25 (40%)
STPGR 2 182..207 6/24 (25%)
STPGR 3 218..243 13/24 (54%)

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