DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8086 and nsp1

DIOPT Version :9

Sequence 1:NP_001260237.1 Gene:CG8086 / 34131 FlyBaseID:FBgn0032010 Length:1603 Species:Drosophila melanogaster
Sequence 2:NP_594158.1 Gene:nsp1 / 2542668 PomBaseID:SPAC26A3.15c Length:598 Species:Schizosaccharomyces pombe


Alignment Length:510 Identity:120/510 - (23%)
Similarity:170/510 - (33%) Gaps:151/510 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   247 NKTPEFSFGIKHHEQRPDYTPAPGTYKPEQVVLEHIPAYSFGLKTKHIQVSDTPAPGAYSPEKSR 311
            |:...||||   ...:|: :.|.|...|....|       || .|.:...|..|:.|.:....:.
pombe     8 NQNSGFSFG---KPAQPN-SAAQGAATPAATGL-------FG-NTNNNTSSTAPSGGLFGSNNAS 60

  Fly   312 LHSAPAYSIAGKAS---QDVVDCTPAPGAY-----------EPEKCVLSRT-PAFSFGHRAELAK 361
            ..|||:....|||:   ......|.:|.::           :|....|..| .|.|.|.:::...
pombe    61 NTSAPSTFSFGKAATTGNSTNASTSSPFSFGSTNTNNTAGAKPLFGGLGSTGSANSTGDKSKNTA 125

  Fly   362 SSDT------PAPGTYN------------PEKVRLDHTPAF--------------TLSGRPETRS 394
            ||.|      |:..|:|            |.......|||.              |.|..|...|
pombe   126 SSATGAATTNPSGSTFNFGSSNNSFNFGKPASTTNTTTPAAASTGSLFGKPAATGTTSNAPPASS 190

  Fly   395 VSETPAPGSYAPEKYRNDRTPAFTFG-----GKHEQRLESSTPAPGDYCPEKVRHDHNPAFSFAG 454
            .|.|||.||           ..|:||     |.......|:|.              |..|||. 
pombe   191 TSTTPATGS-----------GGFSFGKPASLGSTNNASTSTTA--------------NSGFSFG- 229

  Fly   455 RHDLHKPSDTPAPGAYDTEKVRQDHNPAFSFAGRHDLHKPSETPAPGAYSPEKVRQDHNPAFSMA 519
                 ||:.|.|||:..|.      .|:.|..|.:| .||:.:....|  |........||...|
pombe   230 -----KPATTSAPGSNTTV------TPSSSITGTND-SKPAASNTGSA--PTTGFSFGKPAGQAA 280

  Fly   520 GKHSQKVTSDSPAPGDYCPEKVRLDHTPAYSFGVKSDPKVENNTPAPGD--YHPEKVRQDHNPAY 582
            ...:.|.|:.:.:.|            ..:|||..:..:..|...||..  ..|.....|:.|.:
pombe   281 STATDKGTTTTSSAG------------TGFSFGKPATTEDTNKPTAPNSAFTKPATSTGDNKPTF 333

  Fly   583 SFAGRHDLQKP-DNTPAPGAYFPEKVRLDHNPAFSMAGKYDAKVTNDT-PAPG------DYSPEK 639
            ||.   :..|| :||.......|                   .::|:| ||.|      .:|..|
pombe   334 SFG---NTSKPTENTSTTATSAP-------------------PLSNNTKPAEGANQTSSGFSFGK 376

  Fly   640 VRQDTNPAYSFAGRHDLHKPSETPA-PGAYSPEKVRLDHNPAFTMAGKHDQKILN 693
            ...||..:.|..|....:||::..| |||.:  .......|..::..|..|:|||
pombe   377 PATDTTTSTSKTGPLFGNKPADPSAKPGATA--STTPSEPPPSSIKHKTLQEILN 429

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8086NP_001260237.1 None
nsp1NP_594158.1 Nsp1_C 407..520 CDD:282867 6/25 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R852
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

Return to query results.
Submit another query.