DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Pvr and AT5G38260

DIOPT Version :9

Sequence 1:	NP_001162911.1	Gene:	Pvr / 34127	FlyBaseID:	FBgn0032006	Length:	1577	Species:	Drosophila melanogaster
Sequence 2:	NP_198642.1	Gene:	AT5G38260 / 833808	AraportID:	AT5G38260	Length:	638	Species:	Arabidopsis thaliana

Alignment Length:	711	Identity:	138/711 - (19%)
Similarity:	231/711 - (32%)	Gaps:	260/711 - (36%)

- Green bases have known domain annotations that are detailed below.

  Fly   672 DNVNFTCEALAYH-----FDGNLKWFINGEDLK-------ESDSVHIETSHTKYSYKSTVHITTI 724
            |...||...:.:|     ::..:...:..|.|.       |:.|::.|.            :..:
plant    73 DFAEFTISTVKFHVLEMNYESRIIRLVRTEYLNNLCPWHPENRSINQEV------------LPFL 125

  Fly   725 SDRDRGT--YECRAYHNDKDAVYSSREI---------DLYVHDPSAPQWTNGGQEGHSKIKRKLS 778
            .|.:.||  |.|.....|:.|....|::         ..:|..||.|        |:..|...||
plant   126 QDTELGTFYYNCSGPTVDELANGYIRQLGCDEEVGGKSYFVSSPSHP--------GNRAILDGLS 182

  Fly   779 QTLELECASTAVPVAIVRWFKDDKEVTESKLRHIIEKESKLLITHLYPG-DEGVYKCVVEN---R 839
            .:.|   .:..:||:     :...|.|.:  ...:|...|:|......| :.....||...   .
plant   183 ASCE---RNVDIPVS-----RSAMETTAT--NQSLEAIKKVLDVGFELGFNSDCSLCVASKGACG 237

  Fly   840 LDRIERSFTVVISDLP----------GISMAWVWFGVILFLILIGLCVFLAVRYQKEHKRHLALK 894
            .::..::|.....|.|          ||.:...:.|..|..:.: ||.|    :||....|
plant   238 FNQSSKAFVCYCKDEPHEHTCGKMGIGIGLGCGFLGATLITVCL-LCFF----FQKRRTSH---- 293

  Fly   895 AAGLANFEEGAVGHINP-DLTLDEQAELLPYNREFEFPRENLKL-GKQLGAGAFGVVLKGEAKGI 957
                         |:.| |..|....:|..|:  :...|:..|| ...||.|.||.|..|.....
plant   294 -------------HLRPRDNNLKGLVQLKQYS--YAEVRKITKLFSHTLGKGGFGTVYGGNLCDG 343

  Fly   958 RREEPTTTVAVKMVKATADNEVVRALVSELKIMVHLGQHLNVVNLLGAVTKNIAKRELMVIVEYC 1022
            |:      ||||::|....|.  ...::|:..|... .|:|:|:|||...:. :||  .::.|:.
plant   344 RK------VAVKILKDFKSNG--EDFINEVASMSQT-SHVNIVSLLGFCYEG-SKR--AIVYEFL 396

  Fly  1023 RFGNIQNFLLRNRKCFINQINPDTDHIDPSIMTQRMSDNYELHRDTNGGGLKYANVGFPIHSYIN 1087
            ..|::..||                           |:...|:.|
plant   397 ENGSLDQFL---------------------------SEKKSLNLD-------------------- 414

  Fly  1088 EPHNNNTQPPTHRRNSDNDPRSGTRAGRTGSGTATYSYDRQMDTCATVMTTVPEDDQIMSNNSVQ 1152

plant   415 ----------------------------------------------------------------- 414

  Fly  1153 PAWRSNYKTDSTEAMTVTTVDLISWAFQVARGMDYL---SSKKVLHGDLAARNILLCEDNVVKIC 1214
                            |:|:..|  |..||||:|||   ...:::|.|:..:||||.:....|:.
plant   415 ----------------VSTLYRI--ALGVARGLDYLHHGCKTRIVHFDIKPQNILLDDTFCPKVS 461

  Fly  1215 DFGLARSMYRGDNYKKSENGKLPIKWLALESLSDHV--FSTYSDVWSYGIVLWEMF--------- 1268
            |||||:...:.::.....:.:..|.::|.|..|...  .|..|||:|||:::.||.
plant   462 DFGLAKLCEKRESILSLLDARGTIGYIAPEVFSGMYGRVSHKSDVYSYGMLVLEMIGAKNKEIEE 526

  Fly  1269 ------SLAKVP---YPGIDPNQELFNKLNDGYRMEKPKFANQELYEIMLECWRKNPESRP 1320
                  |.|..|   |..::..::.: |..|....|..:.| :::..:.|.|.:.:|.:||
plant   527 TAASNSSSAYFPDWIYKNLENGEDTW-KFGDEISREDKEVA-KKMTLVGLWCIQPSPLNRP 585

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Pvr	NP_001162911.1	IG	346..432	CDD:214652
		Ig	<363..432	CDD:299845
		Ig	466..533	CDD:299845
		IG_like	672..754	CDD:214653	17/104 (16%)
		Ig	674..739	CDD:143165	13/78 (17%)
		IGc2	779..840	CDD:197706	11/64 (17%)
		PKc_like	927..1332	CDD:304357	83/418 (20%)
		Pkinase_Tyr	935..1329	CDD:285015	82/410 (20%)
AT5G38260	NP_198642.1	WAK_assoc	160..251	CDD:373037	20/108 (19%)
AT5G38260	NP_198642.1	PKc_like	327..596	CDD:389743	80/403 (20%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	0	0.000